Entry: AffySpikeU95Subset
Aliases: AffySpikeU95Subset HGU95subset1016 spikedProbesU95
Keywords: datasets
Description: Spike-in data
URL: ../../../library/plw/html/AffySpikeU95Subset.html

Entry: HowToPLW
Aliases: HowToPLW
Keywords: documentation
Description: View HowToPLW
URL: ../../../library/plw/html/HowToPLW.html

Entry: estimateMVbeta
Aliases: estimateMVbeta
Keywords: htest models
Description: Zero mean multivariate t-dist. with covariate dependent scale.
URL: ../../../library/plw/html/estimateMVbeta.html

Entry: estimateSigma
Aliases: estimateSigma
Keywords: htest models design
Description: Fit zero mean multivariate t-distribution, known df
URL: ../../../library/plw/html/estimateSigma.html

Entry: estimateSigmaMV
Aliases: estimateSigmaMV
Keywords: htest models design
Description: Fit zero mean multivariate t-distribution
URL: ../../../library/plw/html/estimateSigmaMV.html

Entry: estimateSigmaMVbeta
Aliases: estimateSigmaMVbeta
Keywords: htest models
Description: Zero mean multivariate t-dist. with covariate dependent scale.
URL: ../../../library/plw/html/estimateSigmaMVbeta.html

Entry: getKnots
Aliases: getKnots
Keywords: univar manip
Description: Spline-knots for plw and lmw
URL: ../../../library/plw/html/getKnots.html

Entry: lmw
Aliases: lmw
Keywords: htest models design
Description: Locally Moderated Weighted-t.
URL: ../../../library/plw/html/lmw.html

Entry: logitT
Aliases: logitTTransform logitTStat studenttTTest
Keywords: univar manip
Description: logit-t and t-test by row
URL: ../../../library/plw/html/logitT.html

Entry: plw-package
Aliases: plw-package
Keywords: package
Description: plw
URL: ../../../library/plw/html/plw-package.html

Entry: plw
Aliases: plw
Keywords: htest models design
Description: Probe level Locally moderated Weighted median-t.
URL: ../../../library/plw/html/plw.html

Entry: scaleParameterPlot
Aliases: scaleParameterPlot
Keywords: univar manip
Description: Scale parameter plotted against mean intensity
URL: ../../../library/plw/html/scaleParameterPlot.html

Entry: statByIndex
Aliases: madByIndex meanByIndex medianByIndex orderStatByIndex sdByIndex meanSdByRow
Keywords: univar manip
Description: Computes statistics by index or by row
URL: ../../../library/plw/html/statByIndex.html

Entry: topRankSummary
Aliases: topRankSummary plotSummaryLog2FC plotSummaryT
Keywords: univar manip
Description: Return or plots analysis result for top ranking or selected probe sets
URL: ../../../library/plw/html/topRankSummary.html

Entry: varHistPlot
Aliases: varHistPlot
Keywords: univar manip
Description: Variance histogram and density
URL: ../../../library/plw/html/varHistPlot.html
