PC-class                Class "PC" represents the result of a simple
                        pairwise comparison between two groups of
                        arrays
array.subset            Given an expression object get a particular
                        subset of arrays defined by the phenoData
db.local.info           Display the contents/clear the contents of the
                        local data directory
details                 Get detailed annotation for exons, transcripts
                        and genes
filters                 Filter vectors of Affymetrix Exon array
                        probeset names according to where they target
gene.graph              Use the X:Map database to find annotated gene
                        structure and generate a plot
gene.legend             Generate a colour bar to use as a legend
gene.strip              Use the X:MAP database to find annotated gene
                        structure and generate a plot for multiple
                        genes
group.indices           Given an expression object get the array
                        indices for a particular set of arrays
mappings                Map between probes, probesets, exons,
                        transcripts and genes
pc                      Simple pariwise comparisons on exon expression
                        data
plotGene                Use the X:MAP database to find annotated gene
                        structure and generate a plot
probes.in.range         Given a set of chromosome coordinates, return
                        the genomic features within
probeset.stats          Generates summary statistics showing intron,
                        exon and gene hits for the spefied probeset
                        list
read.exon               Read a Set of .CEL Files and Phenotypic Data
                        representing exon arrays
si                      Calculate the splicing index
x.rma                   Sample exonmap dataset
xmapDatabase            Connect/disconnect to an xmap database
xmapGene                Open a browser window at the X:Map database,
                        centered on the specified feature
