interactions             package:RpsiXML             R Documentation

_L_i_s_t _i_n_t_e_r_a_c_t_i_o_n_s _i_n _t_h_e _g_i_v_e_n _p_s_i_m_i_2_5_I_n_t_e_r_a_c_t_i_o_n_E_n_t_r_y _o_b_j_e_c_t

_D_e_s_c_r_i_p_t_i_o_n:

     List interactions from an object of the
     'psimi25InteractionEntry-class' object

_U_s_a_g_e:

     interactions(x)

_A_r_g_u_m_e_n_t_s:

       x: An object of 'psimi25InteractionEntry-class', see example 

_V_a_l_u_e:

     A list of interactions

_A_u_t_h_o_r(_s):

     Jitao David Zhang <j.zhang@dkfz.de>, Tony Chiang
     <tchiang@ebi.ac.uk>

_S_e_e _A_l_s_o:

     'psimi25InteractionEntry-class'

_E_x_a_m_p_l_e_s:

     xmlDir <- system.file("/extdata/psi25files",package="RpsiXML")

     hprdxml <- file.path(xmlDir, "hprd_200709_test.xml")
     hprdSet <- parsePsimi25Interaction(hprdxml, HPRD.PSIMI25)

     interactions(hprdSet)

