parseKGML             package:KEGGgraph             R Documentation

_K_G_M_L _f_i_l_e _p_a_r_s_e_r

_D_e_s_c_r_i_p_t_i_o_n:

     The function parses KGML files according to the KGML XML
     documentation.

_U_s_a_g_e:

     parseKGML(file)

_A_r_g_u_m_e_n_t_s:

    file: Name of KGML file

_D_e_t_a_i_l_s:

     The function parses KGML file (depending on XML package).

_V_a_l_u_e:

     An object of 'KEGGPathway-class'.

_A_u_t_h_o_r(_s):

     Jitao David Zhang <URL: mailto:j.zhang@dkfz.de>

_R_e_f_e_r_e_n_c_e_s:

     KGML Manual <URL: http://www.genome.jp/kegg/docs/xml/>

_S_e_e _A_l_s_o:

     'parseEntry', 'parseRelation', 'parseReaction',
     'KEGGPathway-class',

_E_x_a_m_p_l_e_s:

     sfile <- system.file("extdata/hsa04010.xml",package="KEGGgraph")
     kegg.pathway <- parseKGML(sfile)
     kegg.pathway

