GeneColorSet            package:GSEABase            R Documentation

_M_e_t_h_o_d_s _t_o _C_o_n_s_t_r_u_c_t "_G_e_n_e_C_o_l_o_r_S_e_t" _I_n_s_t_a_n_c_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     'GeneColorSet' is a generic for constructing gene color sets
     (i.e., gene sets with "coloring" to indicate how features of genes
     and phenotypes are associated).

_M_e_t_h_o_d_s:

     Available methods are the same as those for 'GeneSet', but a
     'GeneColorSet' requires an additional 'phenotype' argument to
     identify the phenotype that is being colored. See documentation
     for 'GeneColorSet' for examples.

     An additional method is:

     '_s_i_g_n_a_t_u_r_e(_t_y_p_e = "_G_e_n_e_S_e_t",         _p_h_e_n_o_t_y_p_e="_c_h_a_r_a_c_t_e_r")' This
          method constructs a 'color' gene set from an uncolored gene
          set.

_S_e_e _A_l_s_o:

     'GeneColorSet-class'

