e5d0e736dd308c19c6ff3c1436b15373 *CONTENTS
c2918d163dcf0087307e4d49e72af864 *DESCRIPTION
c53ce124f5d7b53d24b59ecf475fdba4 *INDEX
5dbd23ccc5abadd334fdecfca7b6669d *Meta/Rd.rds
4b933cd2a15edba09122c944f0d923c5 *Meta/data.rds
2a789a1a848a9ad235ebc2cf45d193fb *Meta/hsearch.rds
005516bc23bdad6e3aabaf34190a3089 *Meta/nsInfo.rds
77897a02ed94bdf6edf155d94a87c1cf *Meta/package.rds
97ea7a720d4e4dd7b8986f3394c99913 *Meta/vignette.rds
dd49c202530abd2f8f10106dc4689776 *NAMESPACE
0d945ece4aa63439adb16ef5f3f74d9e *R-ex/Rex.zip
f07d3015c4220dea7a7be8c741d2985b *R/VanillaICE
0be0b82af0ee5c5d682d6d3c6248c346 *R/VanillaICE.rdb
c340039806d3b915273caa3486efc47c *R/VanillaICE.rdx
134e3c4093f5696cfecf6e059073c835 *chtml/VanillaICE.chm
4fc275e06fe46ccd85fc418aee5fda23 *data/Rdata.zip
794044f348a71f5ffb877e104eb63298 *data/filelist
9d4c96bd1bbb061cc72aec341ec29127 *doc/ICE.Rnw
aadf737e7e1d4afbef62915cf520ccd5 *doc/ICE.pdf
c1819181745647a0d59c4b2aaea1ad1d *doc/Rplots.ps
e25f2284c13cc8ff785c8fb5ab06ba1e *doc/ice.bib
156722f35982f359b7a921e2576a95f0 *doc/index.html
59f70c2cdf5d1bc186d91142161f46a8 *help/AnIndex
30b76f6011770adb30922a531fb8bc70 *help/Rhelp.zip
b33a50e15048c2315f01b45b61779438 *html/00Index.html
c55e315bc6cfbdfdafb2a46f7542fb31 *html/HmmSnpCallSet-class.html
a899d9fa3324027d17e3d26ab48bba95 *html/HmmSnpCopyNumberSet-class.html
7a0122b36fcd83fb520b92c17ecb7151 *html/HmmSnpSet-class.html
b224fa3b17a08562d120cccc9215148d *html/ParHSet-class.html
abde5372ae41ab0bdb143a4d63f27ad1 *html/ParHmmSnpCallSet-class.html
f0773c0ada3c288c970005bd4ccb66be *html/ParHmmSnpCopyNumberSet-class.html
e8cc4d2facfbe368b315d4421e548ced *html/ParHmmSnpSet-class.html
f31b87e87caebc6a3b4339e6f721618b *html/bind.html
498d60c6bc3748ddbe046f5bd66db570 *html/breakpoints.html
3e288abf984a583021309d322fb298db *html/byArm.html
e9d566fcb45b267d754cabb1a20f555f *html/calculateEmissionProbability.html
9002271fe6f249b9c899690f32c03ffa *html/callEmission.html
02fcc1eb04dbd553b0c2fb8fc63152f9 *html/callsIce.html
4167c23122d4f6c37b4bfa527f317024 *html/chromosome1.html
0ebc79c1c2d9a10e2431ce241e91012b *html/chromosomeArm.html
9d3b33379168321ca6abe2a6371d10dc *html/copyNumberIce.html
b138448fb942775b8f094b3bf5172b43 *html/distance.html
94127382223a30668060a7fd06f95104 *html/emissionProbability.html
9e5f5a01215448f8d2346e64194fffd3 *html/getCallEmission.html
6e18c11dbf7bdd3ceb8dfd3e1a168dc7 *html/getCopyNumberLocation.html
7f632b142fbea891d763dc5b2802e8b1 *html/getCopyNumberScale.html
3655ab9fb61c765a87502b835e6a1f9e *html/getHapmapProbabilities.html
27fbe318d70015af9217d8907bdfdfdb *html/getInitialStateProbability.html
9772aaeaafdede2e98cf8012f406d634 *html/getLohProbability.html
7138ed9165531fc247a34f6c7a99ab83 *html/getTransitionProbability.html
3c5d018b1e310fc8cdde2e64c453ce21 *html/hSet-class.html
063f48b9eee7b88de6eb0127f1e2a0da *html/hapmapProbabilities.html
871f074603b8388e0d3079eebc3e4a45 *html/hmm.html
4b50b0eea720b3dc236fa5a64a60b717 *html/hmmBySample.html
9a45231d07545605b612689b33d6cbfc *html/initialStateProbability.html
7acb286b2e3adbba38502668d8d91f6b *html/isMissing.html
2ec121fc49dac535a674bb791f2fa3d6 *html/likelihood.html
52eb800bd17ece0a9f052d7d8c918b7b *html/locationCopyNumber.html
d9655b746b0542c5bece05f0538aab62 *html/numberStates.html
102c79c8d40bf83dc5459dad5a09b02f *html/pCHOM.html
93ac93f0ad0c37ca41322b28202340dc *html/plotPredictions.html
88a1a908503778ee1efbe98024820913 *html/predictions.html
c15767a91be1ca3f61d280280f7bb4b1 *html/scaleCopyNumber.html
da2133760a7691281db3783bb4efd773 *html/stateNames.html
0eff3dbfe20528c9528de68fa018a412 *html/transitionProbability.html
4df236d0cf3633199d791b407523c5ca *html/viterbi.html
16e89747f5dae3cf5cb3f25d20cb460d *latex/Rhelp.zip
b766dab30be4040e96a5142b50bbe81c *man/VanillaICE.Rd.gz
