dotplotQC {BeadExplorer} | R Documentation

## Plot a subset of QC dotplots

### Description

Plots a series of dotplots for a BeadChip QC data

### Usage

    dotplotQC(beadData, beadQC, qc, subset, col = NULL, currentcol = "black", meansym = 4, arraysym = 19, currentsym = 19,
    meansize = 1.5, arraysize = 1.5, currentsize = 1.5, ...)

### Arguments

`beadData` | Object of class `beadData-class`
`beadQC` | Object of class `beadQC-class`
`qc` | `data.frame` created by `readQC`
`subset` | A numerical vector, denoting the columns of QC to plot
`col` | A vector of colours used to plot each array type
`currentcol` | The colour used to identify the current analysis
`meansym` | The symbol used to identify the mean
`arraysym` | The symbol used to identify the each analysis
`currentsym` | The symbol used to identify the current analysis
`meansize` | The size of the symbol used to identify the mean
`arraysize` | The size of the symbol used to identify each analysis
`currentsize` | The size of the symbol used to identify the current analysis
`...` | Arguments passed to `points`

### Details

This function is primarily an internal function and should not need to be called by the user. The function is used to plot each indivdual dotplot graph by `dotplotArrays`.

### Value

None

### Author(s)

Gareth Elvidge gareth.elvidge@well.ox.ac.uk

### See Also

`dotplotArrays`, `boxplotArrays`,`boxplotQC`

### Examples

    ## Not run:
    data(examplebeadData)
    data(examplebeadQC)
    data(exampleQC)
    boxplotQC(examplebeadData, examplebeadQC, exampleQC,subset=c(1,4,3,2))
    ## End(Not run)

[Package BeadExplorer version 1.4.0 Index]