hgu                 package:spikeLI                 R Documentation

_S_e_l_e_c_t_e_d _P_r_o_b_e _S_e_t _d_a_t_a

_D_e_s_c_r_i_p_t_i_o_n:

     This selected probe sets information contains the sequence of the
     selected probe sets, as well as the match and mismatch onformation
     and Delta G value required for the langmuir analysis

_U_s_a_g_e:

     data(hgu)

_F_o_r_m_a_t:

     A data frame with 11452 observations on the following 9 variables.

     '_P_r_o_b_e._S_e_t._N_a_m_e' Name of probe set

     '_c_o_n_c' a numeric vector

     '_I_p_m' a numeric vector

     '_I_m_m' a numeric vector

     '_S_e_q' DNA Sequence of the probe

     '_D_G_p_m' DG value of perfect match of the probe

     '_D_G_m_m' Delta G value of the mismatch of the probe

     '_D_G_R_N_A' Delta G value of the RNA

     '_F_I_L_E' a factor with levels 'HGU133' 'HGU95'

_R_e_f_e_r_e_n_c_e_s:

     E. Carlon and T. Heim, Physica A 362, 433 (2006).

_S_e_e _A_l_s_o:

     'Ivsc', 'IvsDG', 'collapse', 'SPIKE_IN', 'SPIKE_INA', 'SPIKE_INB',
     'SPIKE_INH'

_E_x_a_m_p_l_e_s:

     data(hgu)
     ## maybe str(hgu) ; plot(hgu) ...

