boxplot-methods             package:lumi             R Documentation

_b_o_x_p_l_o_t _o_f _a _E_x_p_r_e_s_s_i_o_n_S_e_t _o_b_j_e_c_t

_D_e_s_c_r_i_p_t_i_o_n:

     Creating 'boxplot' of sample intensities in a ExpressionSet object

_U_s_a_g_e:

     ## S4 method for signature 'ExpressionSet':
     boxplot(x, range = 0, main, logMode = TRUE, subset = 5000, ...)

_A_r_g_u_m_e_n_t_s:

       x: a 'ExpressionSet' object

   range: parameter of 'boxplot' 

    main: title of the boxplot 

 logMode: whether plot the data in log2 scale or not

  subset: subset of rows used to plot. It can be an index vector, or
          the length of a random subset

     ...: optional arguments to 'boxplot'.

_S_e_e _A_l_s_o:

     'LumiBatch-class', 'boxplot'

_E_x_a_m_p_l_e_s:

     ## load example data
     data(example.lumi)

     boxplot(example.lumi)

