mapperHits-class           package:RMAPPER           R Documentation

_C_l_a_s_s "_m_a_p_p_e_r_H_i_t_s" - _h_o_l_d_s _c_o_l_l_e_c_t_i_o_n _o_f _h_i_t_s _f_r_o_m _M_A_P_P_E_R._C_H_I_P._O_R_G

_D_e_s_c_r_i_p_t_i_o_n:

     A data frame and some metadata about a MAPPER query

_O_b_j_e_c_t_s _f_r_o_m _t_h_e _C_l_a_s_s:

     Objects can be created by calls of the form 'new("mapperHits",
     ...)'. These are annotated data frames.

_S_l_o_t_s:

     '_q_u_e_r_y': character string that provides information on the query
          generating the object 

     '_h_i_t_s': Object of class '"data.frame"' providing information on
          the sequence and aspects of the match 

_M_e_t_h_o_d_s:

     _q_u_e_r_y 'signature(x = "mapperHits")': ... 

     _s_h_o_w 'signature(object = "mapperHits")': ... 

_A_u_t_h_o_r(_s):

     VJ Carey <stvjc@channing.harvard.edu>

_R_e_f_e_r_e_n_c_e_s:

     <URL: http://mapper.chip.org>

_S_e_e _A_l_s_o:

_E_x_a_m_p_l_e_s:

     # see the readMapper function

