LBE-package               package:LBE               R Documentation

_E_s_t_i_m_a_t_i_o_n _o_f _t_h_e _p_r_o_p_o_r_t_i_o_n _o_f _t_r_u_e _n_u_l_l _h_y_p_o_t_h_e_s_e_s, _t_h_e _f_a_l_s_e _d_i_s_c_o_v_e_r_y _r_a_t_e _a_n_d _t_h_e _q-_v_a_l_u_e_s.

_D_e_s_c_r_i_p_t_i_o_n:

     The package LBE allows estimating the proportion of true null
     hypotheses and the false discovery rate.

_D_e_t_a_i_l_s:


       Package:  LBE
       Type:     Package
       Version:  1.3.0
       Date:     2006-12-08
       License:  GPL2

_A_u_t_h_o_r(_s):

     Cyril Dalmasso Maintainer: Cyril Dalmasso <dalmasso@vjf.inserm.fr>

_R_e_f_e_r_e_n_c_e_s:

     Dalmasso C, Broet P, Moreau T (2005): A simple procedure for
     estimating the false discovery rate. Bioinformatics.
     Bioinformatics, 21: 660 - 668.

     Storey JD and Tibshirani R. (2003). Statistical significance for
     genome-wide studies. Proc Natl Acad Sci, 100, 9440-9445.

_S_e_e _A_l_s_o:

     LBE is an alternative method to the one proposed by Storey and
     Tibshirani (2003) for estimating the q-values, this latter method
     being implemented in the package 'qvalue'.

