GTLoadExpression         package:GeneTraffic         R Documentation

_R_e_a_d_s _f_r_o_m _a _G_e_n_e_T_r_a_f_f_i_c _p_r_o_j_e_c_t _s_u_m_m_a_r_y _f_i_l_e

_D_e_s_c_r_i_p_t_i_o_n:

     A GeneTraffic project summary is read from a file representing the
     experiment interpretation for that project.

_U_s_a_g_e:

     GTLoadExpression(filename = "Project.zip")

_A_r_g_u_m_e_n_t_s:

filename: Name of the file containing the GeneTraffic project summary
          in zip format.

_V_a_l_u_e:

     The return value depends on how many chip types the project
     summary file contains. If it has only one,  it returns one
     'exprSet' object, otherwise it returns a list of 'exprSet' objects
     (for 1 color projects). For two color projects, if it has only one
     chip type, it returns one 'marrayRaw' object, otherwise it returns
     a list of 'marrayRaw' objects.

_E_x_a_m_p_l_e_s:

         
         #From a file:
             eset<-GTLoadExpression(filename="Project.zip")
             eset
         #From a GeneTraffic server:
         ## Not run: 
             gt <- GTServer(host = "genetraffic", username="demo", password="pass", port = 80)
             session <- GTLogin(gt)
             pl <- GTGetProjectList(gt,session)
             filename <- GTGetProjectSummary(gt, session, pl[[1]]$"project_id")
             GTLogout(gt,session)
             eset <- GTLoadExpression(filename)
             eset
         
     ## End(Not run)

