getID              package:BeadExplorer              R Documentation

_G_e_t _e_x_p_r_e_s_s_i_o_n _d_a_t_a _f_o_r _a _g_i_v_e_n _g_e_n_e _I_D

_D_e_s_c_r_i_p_t_i_o_n:

     Obtain expression data for a given gene ID

_U_s_a_g_e:

     getID(id, beadData, sample, manifest, searchFields = c("Target"), returnFields = c("Symbol","Accession"))

_A_r_g_u_m_e_n_t_s:

      id: A character or vector corresponding to the Illumina gene
          ID(s) 

beadData: Object of class 'beadData-class' 

  sample: Numeric, sample number to return data

manifest: A 'data.frame' of manifest data to use. For example, as
          produced by 'readManifest'

searchFields: The manifest column name to search for ID 

returnFields: The manifest column names to return  

_D_e_t_a_i_l_s:

     Obtain annotation information for a given Illumina gene ID

_V_a_l_u_e:

     'data.frame' of experiment data for a given sample and gene ID(s)

_A_u_t_h_o_r(_s):

     Gareth Elvidge gareth.elvidge@well.ox.ac.uk

_S_e_e _A_l_s_o:

     See Also as 'help', 'readManifest'

_E_x_a_m_p_l_e_s:

     ## Not run: 
     data(examplebeadData)
     man<-readManifest("d:\Bead_Set_Manifest\Human_WG-6.csv")
     getID("GI_23097300-A", examplebeadData, 2, man)
     ## End(Not run)

