extract             package:BeadExplorer             R Documentation

_E_x_t_r_a_c_t _c_o_l_u_m_n_s _f_r_o_m _a _B_e_a_d_S_t_u_d_i_o _f_i_l_e

_D_e_s_c_r_i_p_t_i_o_n:

     Extract columns from a BeadStudio 'gene profile.csv' file

_U_s_a_g_e:

     extract(filenames = NULL, match = "AVG_Signal", verbose = TRUE)

_A_r_g_u_m_e_n_t_s:

filenames: A character file path of a 'gene profile.csv' file

   match: A term to identify the columns to extract

 verbose: Logical, should a commentary be provided

_D_e_t_a_i_l_s:

     This function extracts certain columns from the BeadStudio 'gene
     profile.csv' output file that contain  the 'match' arguments in
     the column header.

_V_a_l_u_e:

     A 'data.frame' of extracted columns

_A_u_t_h_o_r(_s):

     Gareth Elvidge gareth.elvidge@well.ox.ac.uk

_E_x_a_m_p_l_e_s:

     ## Not run: 
     ##Extract columns representing detection calls
     #extract(match="Detection")

     ##Extract columns representing number of beads used to analyse each transcript
     #extract(match="Avg_NBEADS")
     ## End(Not run)

