buildGOgraph            package:ontoTools            R Documentation

_b_u_i_l_d _g_r_a_p_h_N_E_L _c_o_r_r_e_s_p_o_n_d_i_n_g _t_o _b_i_o_c _G_O _e_n_v_i_r_o_n_m_e_n_t

_D_e_s_c_r_i_p_t_i_o_n:

     build graphNEL corresponding to bioc GO environment

_U_s_a_g_e:

     buildGOgraph(useenv=GOMFPARENTS)

_A_r_g_u_m_e_n_t_s:

  useenv: useenv: environment to be used

_D_e_t_a_i_l_s:

     all GO MF tags are nodes, edges drawn from node to parent

_V_a_l_u_e:

     graphNEL instance

_A_u_t_h_o_r(_s):

     Vince Carey <stvjc@channing.harvard.edu>

_S_e_e _A_l_s_o:

     Biograph package

_E_x_a_m_p_l_e_s:

     # takes a while; trivial invocation

