summary-methods           package:SNPchip           R Documentation

_M_e_t_h_o_d_s _f_o_r _F_u_n_c_t_i_o_n _s_u_m_m_a_r_y

_D_e_s_c_r_i_p_t_i_o_n:

     Methods for function 'summary'

_M_e_t_h_o_d_s:


     _o_b_j_e_c_t = "_A_N_Y" describe this method here 

     _o_b_j_e_c_t = "_S_n_p_C_a_l_l_S_e_t" calculates percent homozygous calls, and
          percent heterozygous calls for each chromosome, and then
          aggregated over all autosomes.

     _o_b_j_e_c_t = "_A_n_n_o_t_a_t_e_d_S_n_p_S_e_t" calculates average copy number,
          standard deviation of copy number, percent homozygous calls,
          and percent heterozygous calls for each chromosome, and then
          aggregated over all autosomes.

