runCompIndep          package:simulatorAPMS          R Documentation

_F_u_n_c_t_i_o_n _t_h_a_t _s_e_t_s _u_p _p_r_e_l_i_m_s _f_o_r _c_o_m_p_I_n_d_e_p._R

_D_e_s_c_r_i_p_t_i_o_n:

     Makes sure that the same set of proteins are used for both
     TSNMatrix and the estimate

_U_s_a_g_e:

     runCompIndep(TSNMat, estMat, intersectMat)

_A_r_g_u_m_e_n_t_s:

  TSNMat: Incidence Matrix for the TSN bipartite graph 

  estMat: Incidence Matrix for the estimate bipartite graph

intersectMat: How the complexes in TSN intersects with complexes in the
          estimate

_D_e_t_a_i_l_s:

     See above

_V_a_l_u_e:

     Matrix that calculates the probablistic independence that a
     protein will be in both complex C-i of the TSN and K-j in the
     estimate.

_A_u_t_h_o_r(_s):

     Tony Chiang

