allOrfs	Allorf
assemble	assemble
AtoR	AtoR
AtoT	AtoR
compoSeq	compos.seq
concat	concat
dnaToRna	dna.rna
exactWord	exact.word
fastaDescription	fasta.descript
freeAllSeq	free.all.seq
freeSeq	free.seq
GeneR	01GeneR
getAccn	getAccn
getBegSeq	getAccn
getEndSeq	getAccn
getParam	getParam
getSeq	getseq
getSeqSize	getAccn
getStrand	getAccn
globals	02globals
indexEmbl	indexfasta
indexFasta	indexfasta
indexGbk	indexfasta
insertSeq	insert
makeIndex	makeIndex
maxOrf	Allorf
multiExtract	getseq
paramFromIndex	paramFromIndex
placeString	placestring
posMaskedSeq	posMaskedSeq
readEmbl	readseq
readEmblLocation	read.gbk.location
readFasta	readseq
readGbk	readseq
readGbkLocation	read.gbk.location
readSeq	readseq
revComp	revcomp
rnaToDna	dna.rna
RtoA	AtoR
RtoT	AtoR
seqNcbi	sequrl
seqSize	seqsize
seqUrl	sequrl
setAccn	setAccn
setBegSeq	setAccn
setEndSeq	setAccn
setParam	setParam
setSeqSize	setAccn
setStrand	setAccn
showTable	translation
sizeSeq	sizeseq
sizeSeqEmbl	sizeseqfasta
sizeSeqFasta	sizeseqfasta
sizeSeqGbk	sizeseqfasta
str2ascii	str2ascii
strComp	revcomp
strCompoSeq	compos.seq
strMultiExtract	getseq
strReadEmbl	readseq
strReadFasta	readseq
strReadGbk	readseq
strTranslate	translation
translate	translation
TtoA	AtoR
TtoR	AtoR
writeEmblComment	writeEMBL
writeEmblLine	writeEMBL
writeEmblSeq	writeEMBL
writeFasta	write.fasta
