GeneR                   Overview of GeneR package
Globals Variables       Globals variables on Gene sequences
AllOrfs                 Get ORFs from a sequence
Assemble                Create a sequence by gathering parts a
                        sequence
AtoR                    Conversion of addresses
CompoSeq                Composition in mono, di or trinucleotides of a
                        sequence
Concat                  Concatenate two sequences into a third one
DnaToRna                Transformation from T to U in a sequence, and
                        the reverse
ExactWord               Look for motifs in a sequence
FastaDescription        Read the description field from a fasta file
FreeAllSeq              Free all sequences
FreeSeq                 Free one sequence
GetAccn                 Return globals variables of a sequence
GetParam                Give global variables associated to a sequence
GetSeq                  Extract regions from a sequence
IndexFasta              Create an index for a fasta,embl,gbk file
InsertSeq               Insert a sequence in another sequence
MakeIndex               Make an index for a bank file
ParamFromIndex          Extract parameters from an index file
PlaceString             Put a character string into a sequence buffer.
posMaskedSeq            Get all masked regions
Read location           Get features from a GeneBank file
ReadSeq                 Read a sequence from a Fasta, Embl or GeneBank
                        file.
Reverse complementary   Performs the reverse of a sequence
SeqSize                 Size of all sequence buffers
SeqUrl                  Download a sequence in Fasta / Genbank / Embl
                        format from Ncbi or Srs
SetAccn                 Set globals variables of a sequence
SetParam                Set global variables associated to a sequence
SizeSeqFasta            Size of a sequence from a fasta/embl/gbk file
SizeSeq                 Size of a sequence in a bufseq
Str2ascii               Convert a string in its ascii code
Translation             Translation from DNA trinucleotides to
                        proteine
WriteEmblSeq            Write to Embl file
WriteFasta              Write sequences into fasta file format
