getPPM {transite} | R Documentation

## Get Position Probability Matrix (PPM) from motif object

### Description

Return the position probability matrix of the specified motif.

### Usage

    getPPM(motif)

### Arguments

`motif` | object of class `RBPMotif`

### Value

The position probability matrix of the specified motif

### See Also

Other motif functions: `generateIUPACByKmers`, `generateIUPACByMatrix`, `generateKmersFromIUPAC`, `getMotifById`, `getMotifByRBP`, `getMotifs`, `initIUPAClookupTable`, `motifsMetaInfo`, `setMotifs`

### Examples

    getPPM(getMotifById("M178_0.6")[[1]])

[Package transite version 1.2.1 Index]