b05b2835dacf6caf5644297ff8a054c0 *DESCRIPTION
186d1f42bd997bac4e8450f9e13e26c8 *INDEX
263002d46695d823f2f357638fbc71b6 *Meta/Rd.rds
4b5c02cdf4f8b21dce4c01dacd314acf *Meta/data.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
4c22afd97040074803dec2e22551b1fa *Meta/hsearch.rds
fd7d1d93020f2bb79555921aba09c4aa *Meta/links.rds
312e9459747d7a348374fbd15ba6be46 *Meta/nsInfo.rds
c452830471d2cb05cd241a8d9c49190c *Meta/package.rds
21f13349f932bd7ac1f433c5e532d25a *Meta/vignette.rds
6e08034f74f8210c129eeecbc14b72cf *NAMESPACE
d41d8cd98f00b204e9800998ecf8427e *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/transcriptR
27ed32ead7b51e3948f841c57f12d22d *R/transcriptR.rdb
4b92ff93dd9a8d83221391f0aba48e27 *R/transcriptR.rdx
cdccf718c0f06aa2b18213b6d1899638 *data/annot.rda
3292676f3b034c821e78e5ba5ed955f1 *data/cds.rda
1b1ba5e803d213909fdfda9ee7ef6fd4 *data/datalist
bde948fa74c19e5c334b355904c7b1f9 *data/tds.rda
29123ca7b1c27c22c15d4f8873a87a6d *doc/index.html
e64758f00d5f437f0917a224b6dcf653 *doc/transcriptR.R
81c92839043b901e0d64be31e975e329 *doc/transcriptR.Rmd
53cbec673b83e8ed1d4308267124d249 *doc/transcriptR.pdf
d50801198a9fc94ca2d340ba90cf9e15 *extdata/chip_reads.bam
b1bd75dd1f9641b9e89f1381a486d259 *extdata/chip_reads.bam.bai
7f2999eb7940a0c31d83d3a39444a75b *extdata/peaks.txt
b3efed05f16945956ab43ba1657823da *extdata/rna_reads.bam
1b5a7ab4d4b50c588dc2b61806e1537f *extdata/rna_reads.bam.bai
f47c69f99c9535dde5180b75f6485c58 *help/AnIndex
314c16a2b899da9516d6d65f449d82d0 *help/aliases.rds
905cdfdd3600deb94e18961c5e2b8418 *help/paths.rds
5f70f111af1c507bc9630a65b12458e0 *help/transcriptR.rdb
4709ae84d8eb7ad2cc10209ee923192b *help/transcriptR.rdx
73e3243670adb7ddc5f004c989b5459a *html/00Index.html
1fcd9e647df560ef3facc8b9144eda73 *html/ChipDataSet-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
68a40bf8c6703cc2beafb6b1d4871c5c *html/TranscriptionDataSet-class.html
6e4cc0d50cdc987dda55c5d70c1a47c5 *html/addFeature-methods.html
1aa030de12c79eedbaae8a3753a05f87 *html/annot.html
fc43cf19362be5eedfe8ad6d0e3753ec *html/annotateTranscripts-methods.html
c45c761c0f0144f2cd7aecdef9832104 *html/breakTranscriptsByPeaks-methods.html
52120a77c30e2a1cd37c41f29cc1ab5a *html/cds.html
d02cfa5bbef58d4454cae524cc55a953 *html/constructCDS.html
a67a14591a10691f2a2027ff09dd7c1d *html/constructTDS.html
1886f8d9f37906333e2c193b97ff34a2 *html/detectTranscripts-methods.html
fe7c50447bed8e9b4aa02894e69f94f2 *html/estimateBackground-methods.html
4081d65aa82631e538fcb52a326fc1d9 *html/estimateGapDistance-methods.html
47b057724027b5d425a45f64854a968b *html/exportCoverage-methods.html
c7f166c8b7d5e38afcc4863fdd6855bd *html/getConfusionMatrix-methods.html
6a02161920046741ae893aed9ae1eb37 *html/getGenomicAnnot-methods.html
b62503b63d1e222b9f8c2355293973b1 *html/getPeaks-methods.html
457e5012171471307b21a510264dfb3a *html/getPredictorSignificance-methods.html
ccc93acef4e602ab91e3c7642f8c9c79 *html/getProbTreshold-methods.html
32965cee449b3d172207a5b392b167fd *html/getQuadProb-methods.html
1bc53ed4bacdcb7e7ad0d2601ed0db4b *html/getTestedGapDistances-methods.html
e0731be9705fae8f7deb46169304bfc6 *html/getTranscripts-methods.html
b701fafda07f28784633a327214bc4f9 *html/peaksToBed-methods.html
cb439d04f51e3cc65611256f44807364 *html/plotErrorRate-methods.html
e34ae312ce7d79c2ccff25b0944caddf *html/plotFeatures-methods.html
775233f3554c8d9d74632302211e1465 *html/plotGenomicAnnot-methods.html
c5ff5db99b93a5b38265885610d067ea *html/plotROC-methods.html
74b31d1d39c3c93b623aba0c530f5660 *html/predictStrand-methods.html
1d1b3dd081e765b7ac4fa47d15be847c *html/predictTssOverlap-methods.html
0034127813b2d0591f22a3bdc9d8d089 *html/show.html
410e48304e45ea68f7b904760bba4265 *html/tds.html
5ddbcf80a1420d91b7baea64ee0e4ce6 *html/transcriptsToBed-methods.html
