strandCheckR-package	strandCheckR-package
calculateStrandCoverage	calculateStrandCoverage
calculateStrandNbReads	calculateStrandNbReads
checkPairedEnd	checkPairedEnd
concatenateAlignments	concatenateAlignments
filterDNA	filterDNA
getWinFromBamFile	getWinFromBamFile
getWinFromGranges	getWinFromGranges
getWinFromIRanges	getWinFromIRanges
getWinFromReadInfo	getWinFromReadInfo
getWinOfAlignments	getWinOfAlignments
intersectWithFeature	intersectWithFeature
keptProbaWin	keptProbaWin
keptReadFragment	keptReadFragment
plotHist	plotHist
plotWin	plotWin
strandCheckR	strandCheckR-package
summarizeHist	summarizeHist
