setEmissionProbabilities {srnadiff} | R Documentation

## Set emission probabilities (for the HMM step): probability to have a p-value not less than a threshold in the "not-differentially expressed" state, and a p-value not greater than this threshold in the "differentially expressed" state (supposed equal).

### Description

Set emission probabilities (for the HMM step): probability to have a p-value not less than a threshold in the "not-differentially expressed" state, and a p-value not greater than this threshold in the "differentially expressed" state (supposed equal).

### Usage

    setEmissionProbabilities(object, probability)

    ## S4 method for signature 'sRNADiff,numeric'
    setEmissionProbabilities(object, probability)

### Arguments

`object` | An `srnadiff` object.
`probability` | The emission probability

### Value

The same object

### Examples

    exp <- sRNADiffExample()
    exp <- setEmissionProbabilities(exp, 0.9)

[Package srnadiff version 1.4.0 Index]