TFspecificModels {sevenC} | R Documentation

## TF specific parameters for logistic regression in sevenC

### Description

sevenC was trained on 124 TF ChIP-seq data sets from ENCODE. Specific parameters are provided in this data set.

### Usage

    TFspecificModels

### Format

A `data.frame` with 868 rows and 7 columns.

TF

  TF name used in ChIP-seq experiment.

file_accession

  File accession ID from ENCODE project

term

  Model term name. See `modelBest10Avg` for more detials.

estimate_mean

  Mean parameter estimate in 10-fold cross-validation

estimate_median

  Median parameter estimate in 10-fold cross-validation

estimate_sd

  Standard deviation of parameter estimate in 10-fold cross-validation

### See Also

`modelBest10Avg` and `cutoffByTF`

[Package sevenC version 1.4.0 Index]