bisConversionControl {sesame} | R Documentation

## Compute internal bisulfite conversion control

### Description

Compute GCT score for internal bisulfite conversion control. The function takes a `SigSet` as input. The higher the GCT score, the more likely the incomplete conversion. The lower the GCT score, the more likely over-conversion.

### Usage

    bisConversionControl(sset, use.median = FALSE)

### Arguments

`sset` | signal set
`use.median` | use median to compute GCT instead of mean

### Value

GCT score (the higher, the more incomplete conversion)

### Examples

    sset <- makeExampleSeSAMeDataSet('HM450')
    bisConversionControl(sset)

[Package sesame version 1.2.0 Index]