dbe4d1e332b4bba0a4e7603efc0b9534 *DESCRIPTION
1a5ab17ffc6dc99ccecbd891cb755ced *INDEX
8eabbce0fdf10f724bcb94b1087aa6fd *Meta/Rd.rds
caf424c147253ab6aa03621fae02629f *Meta/data.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
d3bfb2efff617da0079c49ef91bdc08d *Meta/hsearch.rds
2fa78f0f08b0c8b9e79b3d33110ba62f *Meta/links.rds
9974ac4823eaf26b72c98985925ee277 *Meta/nsInfo.rds
c9010fdc0760c318625eecc35827d6fa *Meta/package.rds
8fd1687aa7756d92b6fff31adbc9acc0 *Meta/vignette.rds
015456ecd3f1e8c9c8ee712e9d370949 *NAMESPACE
ac186152ba1cb2017106ebbb9daed362 *NEWS.Rd
ebf0fc819595d631b8bf280c4b049940 *R/scPipe
50534ac85439b904c98a9b410c9ecdfb *R/scPipe.rdb
2d6442d6e49a040794d257428389a951 *R/scPipe.rdx
1dc17379efee0dc44aee270095903ff5 *data/sc_sample_data.RData
2594a9728f0d35790ec31657b0f9c880 *data/sc_sample_qc.RData
d2ef606b4d80afde2dcc99daa120f8cd *doc/index.html
eb95dc99d30e0f2d1093f4d226aeb9f5 *doc/scPipe_tutorial.R
233da7a79cd0dae83554eb1042d48561 *doc/scPipe_tutorial.Rmd
3f0ccb8f4d979d847ff5aeaadec74728 *doc/scPipe_tutorial.html
339e0225f3294bf2bf89ac33d71a73c2 *extdata/ERCC92.fa
6e4cb84dc35b55f6c26e244c3d518583 *extdata/ERCC92_anno.gff3
e6007becb38885068ee4c1569f11676c *extdata/barcode_anno.csv
8577e8f76719bf43c33a7f7db593ef83 *extdata/ens_tiny_anno.gff3.gz
95dcee5780eae0513826393d7731faf6 *extdata/ens_tiny_anno.gtf.gz
4b69e9071aaebe7e0f0b72faba999836 *extdata/ensembl_hg38_chrY.gtf.gz
2775eff980dad9481fe7170ef11b3b29 *extdata/ensembl_y_tiny.gtf.gz
1ec5e129ea424597706f4b625327c69b *extdata/gen_tiny_anno.gff3.gz
84f6ae29496eb56652f373b91bfef183 *extdata/gen_tiny_anno.gtf.gz
220922b0d0b25aa599770ca139e2d2e1 *extdata/ref_tiny_anno.gff3.gz
3876ad19ba15f7f6bb3ec83c3d17ee9f *extdata/report_template.Rmd
ce00af6823086b157f1306d7e5f8af66 *extdata/report_template_slim.Rmd
4f72dbb833c45e8d9417b4bc3a0b4716 *extdata/simu_R1.fastq.gz
6b555e64cd9a0e3dbe416284e857fae2 *extdata/simu_R2.fastq.gz
4ed0ad3b7e96305927e6a2b8e995d2d7 *help/AnIndex
75c9092227102b5bc0799e4b37a4c9a8 *help/aliases.rds
cf0bee3c06235e294d512d8445e5f959 *help/paths.rds
3a0c1876f433e153b84a45331ccf1712 *help/scPipe.rdb
191ce1b1d2e0d299a6663534e488a10f *help/scPipe.rdx
4c32303b7aed813d9279ebbb9299ed99 *html/00Index.html
0120c3fa64ea07c3865a5d7e521281cc *html/QC_metrics.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
0f13281befb25f6302439ab84ca7afb2 *html/UMI_dup_info.html
f529dd5f5ca05556c5496d76cdb5fc52 *html/UMI_duplication.html
bf4a7a26c3a074495ac8d4e2d7d678fc *html/anno_import.html
ef2f24f58893eceb989900c4737cf3c6 *html/anno_to_saf.html
da4c7da8399ebea97aa2b60990560889 *html/calculate_QC_metrics.html
f5902c6ec86a45ae9049c0b3ed099b57 *html/cell_barcode_matching.html
12849f2d6ae7659a2c38d1916feba705 *html/convert_geneid.html
76cee222edbb97acef006bd418d1c14e *html/create_processed_report.html
b20a47d5853e84ba557961d39feb0a01 *html/create_report.html
3cdfb6f743991ad41b3d88bb0a897894 *html/create_sce_by_dir.html
e1745e1068841a4f42da1b14781f9def *html/demultiplex_info.html
0c9fa70f1ea7066e3b550ec8b2d0e820 *html/detect_outlier.html
82751f3435dcb763d04e8d4f3836ed06 *html/dot-qq_outliers_robust.html
dfbfdbfad1d55c0072edda033688a8f5 *html/gene_id_type.html
4d431f83dc2fcfe268ca79ade51dd9d3 *html/get_ercc_anno.html
e812067dfa69589407baa7242178a474 *html/get_genes_by_GO.html
6949fe7361edb35277d69c9c224c00fa *html/get_read_str.html
58869059d19797037780aad58d4a503a *html/organism.html
59213602c1cf76f978795d32ec18718b *html/plot_QC_pairs.html
c176118dd169a4bfd1f8277a7d6dba7c *html/plot_UMI_dup.html
3a77378503a78ba0adc9d9b43f25fc6e *html/plot_demultiplex.html
6cc1ff11b24d3fa2afd941511016c84e *html/plot_mapping.html
907525aa6d7b752adfe1fafd86b243fc *html/remove_outliers.html
67c69bf2db8b175fb5c1ac832ffcfb1a *html/scPipe.html
07857837030309e7db5d8d564f6c09af *html/sc_count_aligned_bam.html
aebe8ad0a75517d0eb649b0bf868f4e5 *html/sc_demultiplex.html
7fd289f80add2ab89d5006b99a4c8634 *html/sc_demultiplex_and_count.html
ba5de1c90a3cadcf5fee328b4bd0be89 *html/sc_detect_bc.html
3a95782dcb1cbe0dfb781ef11964e979 *html/sc_exon_mapping.html
c554383d8e1fde3c7734ddefe2dc28e4 *html/sc_gene_counting.html
84d77b8e5542cc08054bb074ee74bd80 *html/sc_sample_data.html
5af8677dafdf1edf8e6f8c105faa6453 *html/sc_sample_qc.html
fdb6c3ece47922f108bed689f66fa40a *html/sc_trim_barcode.html
aed8722363a258480146d6bce4a5211b *libs/i386/scPipe.dll
26c578f4b19f2923f9da7c20e529b691 *libs/x64/scPipe.dll
e17bcd270318aaaabf8568c328e3d59c *scPipe.png
a4e7b825ee1d624e008b5bcb4659e78d *workflow.png
