BrowserView-class {rtracklayer} | R Documentation

## Class "BrowserView"

### Description

An object representing a genome browser view of a particular segment of a genome.

### Objects from the Class

A virtual Class: No objects may be created from it directly. See `browserView` for obtaining an instance of an implementation for a particular genome browser.

### Slots

`session`:

  Object of class `"BrowserSession"` the browser session to which this view belongs.

### Methods

This specifies the API implemented by each browser backend. Note that a backend is not guaranteed to support all operations. See the backend-specific documentation for more details. The only built-in backend is `UCSCView`.

`browserSession(object)`

  Obtains the `BrowserSession` to which this view belongs.

`close(object)`

  Close this view.

`range(object)`

  Obtains the `GRanges` displayed by this view.

`trackNames(object)`

  Gets the names of the visible tracks in the view.

`trackNames(object) <- value`

  Sets the visible tracks by their names.

`show(object)`

  Outputs a textual description of this view.

`visible(object)`

  Get a named logical vector indicating whether each track is visible.

`visible(object) <- value`

  Set a logical vector indicating the visibility of each track, with the same names and in the same order as that returned by `visible(object)`.

### Author(s)

Michael Lawrence

### See Also

`browserView` for obtaining instances of this class.

[Package rtracklayer version 1.44.4 Index]