ae075240be742c0969aad9c94e6a5e31 *CITATION
597185e52fa9e1269f7edce0399e3d23 *DESCRIPTION
83e32a02102bd5db99b1abe76e72e452 *INDEX
50e6cd3cfd18927e1068446540b2ac85 *Meta/Rd.rds
250db1679760fc777c0542b7ff5514ee *Meta/data.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
a6e601cfa91b68bf33c4539a127df794 *Meta/hsearch.rds
732bc15e724d2da1f0daa0d941fe7928 *Meta/links.rds
59d9ee3ba6f44d2ef88f8c635183ea09 *Meta/nsInfo.rds
a72e53fbf23541ed4452b26644ed72aa *Meta/package.rds
0b441e7c96db42092f8ad1076745d544 *Meta/vignette.rds
e252bd722268a57cd6ebc4065b35b52b *NAMESPACE
88799e12a0bcb0bfc36b476bcb5951ad *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/rTRM
c90ebbb1ba1702df12de5a9bf96b3ec5 *R/rTRM.rdb
24cb07bcd51749b7826b3568cc7dfbc0 *R/rTRM.rdx
39cf1ac4f3cf9c8cc4705db309db9578 *data/biogrid_hs.rda
ad0a8c78b1877871d539d9de7f700ea3 *data/biogrid_mm.rda
f246fde7976b255f72367afee71bf9d9 *data/datalist
2bd1f5b9fc49bd5ba9911be8dd79973a *db/database.db
3c90d8c315cde66b14a4f346f33a7a85 *doc/index.html
c8315ed8a0930da62df1f875d02c3118 *doc/rTRM_Introduction.R
10e871217ea32f1b3b025655c7337042 *doc/rTRM_Introduction.Rnw
b2c313e8c21fd58621325675b3e6348d *doc/rTRM_Introduction.pdf
98b9ba03259ae6d5fc4516e7a658a10a *extra/ESC-expressed.txt
f658dbb8940b92bfdafc3dcf2cdb698f *extra/ESC_Sox2_peaks.txt
fbb496fd5991c64b1437c46008ae2c4a *extra/example.rda
ef10b0ee264bece1a4bc5de1d57d5102 *extra/pwm_mm_logn.rda
437a3b466c73481572d3acda987eacef *extra/sox2_enr.rda
8bf034224b0f19bbbb6cb98c90e979af *extra/sox2_motif_list.rda
380492bb98fe9ecd48241bc9ab42771c *extra/test.R
4fd5f8a7026274a26f8077d8a56011be *help/AnIndex
7f36bfbc2c6217e3213747f9d829ee0a *help/aliases.rds
862eccf14584b2e43b309b7b93d4f09c *help/paths.rds
bf2cc85f5096c1a1a199d7a8d78eb3fa *help/rTRM.rdb
ec9e99b5c1e0305fe64d98eb0d4199e5 *help/rTRM.rdx
ee35c5f7c3e98d44d847da4d9c9b8f4a *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
75d4c5f0e0a7a816574150254f909b81 *html/annotateFreq.html
df0bf4165cb20887e71de89da302a034 *html/annotateModule.html
e32f520a538d4c74a3fd68f9a0fa6e76 *html/annotateTRM.html
dced01733552a69fd78a0d9bd08fef61 *html/biogrid_hs.html
d4a3f94b55979ea36ee9fbea5a40fad5 *html/biogrid_mm.html
0329134f6b510860bac250712e6c15bb *html/findTRM.html
9c78dfe44c647419cb4a1503f5f2e3f7 *html/getAnnotations.html
d78dbcd9d974dad978a6d856361e110e *html/getBiogridData.html
cd94e4bea9ab54409a95f165e3d50946 *html/getConcentricList.html
5a1ee6bf70c848221e2059f7a1c6ae7e *html/getLargestComp.html
0b283414fc7468a85b00039d6fc8bea7 *html/getMaps.html
9dd4def0b0a380c75c8ce8185ac6e7f6 *html/getMatrices.html
86a677f44936809fc94b5243d76fb9b4 *html/getMotifsFromEntrezgene.html
299a920d694d5b1ced5bfc1574cb0cec *html/getMotifsFromSymbol.html
439ebdfa01c9c611794e244e48fc511d *html/getOrthologFromMatrix.html
e89b0c37520b54de4275531af7b72afc *html/getOrthologs.html
d654af63e9c3c98a8d9b8f7f06e95bfb *html/getOrthologsFromBiomart.html
195fbec4c9d89d4df41035c601f614e2 *html/getSequencesFromGenome.html
62348baea685c470c9e39782d65b52af *html/getSimilarityMatrix.html
4d4e64ecca0e332b3f3811efa7096dd6 *html/getTFclass.html
ae98b745333a784df3201c9759afdcad *html/getTFclassFromEntrezgene.html
071fe1de81e7835e4992e91ad251007a *html/getTFterms.html
a1f83ffd2d01fa577a4320246ba02449 *html/initBiomart.html
4faf3294654a56b9f8c60c93b9fc504b *html/layout.arc.html
6ee09ea4c8146fbcaeefc4177b756942 *html/layout.concentric.html
f1dd5298c0433f0f1083ff7d48d51f60 *html/plotDegree.html
1500ec841b1300029a1a51c3b557635c *html/plotGraph.html
92d8f3acac776e3e82af5b9a6e89227d *html/plotTRM.html
77ac4f2ec7b4901f5602836b22dde6a1 *html/plotTRMlegend.html
918560436d34462de8b9c0031be02b47 *html/processBiogrid.html
0b445f7d5bbb56064fa537211a663344 *html/rTRM-package.html
cfd81694829bcf4e26a4cf7c6fefa6d3 *html/removeVertices.html
c1a37b6607aac5d7e2b57fac26544210 *html/writeTRMreport.html
f41c2ce67d4c05dd947ee755befef8e9 *unitTests/test_findTRM.R
