proBatch-package	proBatch
.corr_distribution	dot-corr_distribution
.corr_distribution_prot	dot-corr_distribution_prot
adjust_batch_trend	adjust_batch_trend
center_peptide_batch_medians	center_peptide_batch_medians
color_list_to_df	color_list_to_df
correct_batch_effects	correct_batch_effects
correct_with_ComBat	correct_with_ComBat
create_peptide_annotation	create_peptide_annotation
dates_to_posix	dates_to_posix
date_to_sample_order	date_to_sample_order
example_peptide_annotation	example_peptide_annotation
example_proteome	example_proteome
example_proteome_matrix	example_proteome_matrix
example_sample_annotation	example_sample_annotation
fit_nonlinear	fit_nonlinear
generate_colors_for_numeric	generate_colors_for_numeric
get_peptide_corr_df	get_peptide_corr_df
get_sample_corr_distrib	get_sample_corr_distrib
log_transform	log_transform
long_to_matrix	long_to_matrix
matrix_to_long	matrix_to_long
merge_rare_levels	merge_rare_levels
normalize	normalize
normalize_data	normalize_data
normalize_sample_medians	normalize_sample_medians
plot_boxplot	plot_sample_mean_or_boxplot
plot_corr_matrix	plot_corr_matrix
plot_heatmap	plot_heatmap
plot_hierarchical_clustering	plot_hierarchical_clustering
plot_iRT	plot_iRT
plot_PCA	plot_PCA
plot_peptides_of_one_protein	plot_peptides_of_one_protein
plot_peptide_corr_distribution	plot_peptide_corr_distribution
plot_protein_corrplot	plot_protein_corrplot
plot_PVCA	plot_PVCA
plot_sample_corr_distribution	plot_sample_corr_distribution
plot_sample_corr_heatmap	plot_sample_corr_heatmap
plot_sample_mean	plot_sample_mean_or_boxplot
plot_sample_mean_or_boxplot	plot_sample_mean_or_boxplot
plot_single_feature	plot_single_feature
plot_spike_in	plot_spike_in
plot_with_fitting_curve	plot_with_fitting_curve
proBatch	proBatch
quantile_normalize	quantile_normalize
sample_annotation_to_colors	sample_annotation_to_colors
sample_color_scheme	sample_color_scheme
