plot.gseaData {phenoTest} | R Documentation

## GSEA-like Plot.

### Description

Builds a GSEA plot using a `gseaData` object. `gseaData` object can be obtained with the `gsea` function.

### Usage

    plot.gseaData(x,selGsets,selVars,...)

### Arguments

`x` | this has to be of class `gseaData`
`selGsets` | object of class `character` containing the names of the gene sets that we want to plot.
`selVars` | object of class `character` containing the names of the variables that we want to plot.
`...` | Arguments to be passed to `plot`.

### Author(s)

Evarist Planet

### References

Aravind Subramanian, (October 25, 2005) Gene Set Enrichment Analysis. www.pnas.org/cgi/doi/10.1073/pnas.0506580102

### Examples

    #for examples see the help file of gseaSigntaures: ?gseaSignatures

[Package phenoTest version 1.32.0 Index]