plot_ordering_genes {monocle} | R Documentation

## Plots genes by mean vs. dispersion, highlighting those selected for ordering

### Description

Each gray point in the plot is a gene. The black dots are those that were included in the last call to setOrderingFilter. The red curve shows the mean-variance model learning by estimateDispersions().

### Usage

    plot_ordering_genes(cds)

### Arguments

`cds` | The CellDataSet to be used for the plot.

[Package monocle version 2.12.0 Index]