NBdesign {maSigPro} | R Documentation

## Experimental design for RNA-Seq example

### Description

`NBdesign` contains a subset of a bigger normalized negative binomial simulated dataset.

### Usage

    data(NBdesign)

### Format

A matrix with 36 rows and 4 colums

rows [1:36] "G1.T1.1" "G1.T1.2" "G1.T1.3" "G1.T2.1" ...

columns [1:6] [1] "Time" "Replicates" "Group.1" "Group.2"

### Details

Samples are given in rows and experiment descriptors are given in columns. Row names contain sample names.

`"Time"` indicates the values that variable Time takes in each experimental condition. There are 6 time points.

`"Replicates"` is an index indicating the same experimental condition.

`"Group.1"` and `"Group.2"` columns indicate assigment to experimental groups, coding with 1 and 0 whether each sample belongs to that group or not.

### Examples

    data(NBdesign)

[Package maSigPro version 1.56.0 Index]