estimateLogicle.GatingHierarchy {flowWorkspace} | R Documentation

## Compute logicle transformation from the flowData associated with a GatingHierarchy

### Description

See details in ?flowCore::estimateLogicle

### Usage

    ## S3 method for class 'GatingHierarchy'
    estimateLogicle(x, channels, ...)

### Arguments

`x` | a GatingHierarchy
`channels` | channels or markers for which the logicle transformation is to be estimated.
`...` | other arguments

### Value

transformerList object

### Examples

    ## Not run:
     # gs is a GatingSet
     trans.list <- estimateLogicle(gs[[1]], c("CD3", "CD4", "CD8"))
     # trans.list is a transformerList that can be directly applied to GatinigSet
     gs <- transform(gs, trans.list)

    ## End(Not run)

[Package flowWorkspace version 3.32.0 Index]