e7c87cbb6173edfea2e59a60cbacad76 *CITATION
a4b986df31cb0d073b4cd7319b18dc3b *DESCRIPTION
f37e86ec57ee7286e851c5a457227162 *INDEX
84dcc94da3adb52b53ae4fa38fe49e5d *LICENSE
ce40b289840e1130efeee79e6e0c84e5 *Meta/Rd.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
01baf5682154ed9dff2ead7e91af4385 *Meta/hsearch.rds
9215996c7c73e7a456e64b2230dc32ee *Meta/links.rds
c737cc2853c3f0b251cc5f101f38bacf *Meta/nsInfo.rds
6cbd544c95a6cad91c65abbaa9f6776c *Meta/package.rds
9db36e0a1cffae2b90d81610ecb18248 *Meta/vignette.rds
e50b4be564080c3aeac943859b8e426b *NAMESPACE
c347a6c6982c09fdcc21b0f303264b45 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/esATAC
73931e8a052fbcaf8d20b840469764b0 *R/esATAC.rdb
740d58a82dd21850f4d1fb9f81507583 *R/esATAC.rdx
bfd63577fea28b078c172830c49b2ebb *doc/esATAC-Introduction.R
115b35bf54e66a21b14c25871fe57fa8 *doc/esATAC-Introduction.Rmd
319a1888a462a0d2dbf74b8d221d2c85 *doc/esATAC-Introduction.html
c9efa72813fa2e25335d4617f8507225 *doc/index.html
36743e99f29d61bd236bfb0de1494e52 *extdata/CustomizedMotif.txt
3f2358b92a1a92db4c219a5ce642bbfa *extdata/Example.sam.bz2
abed1938fb2f2008207c1e58134aa8d1 *extdata/Example_peak1.bed.bz2
94a7776ecdd7a21959667efea87e798b *extdata/Example_peak2.bed.bz2
c7be260d03ee691324497b0012046464 *extdata/MotifPFM.rds
8a138c786b2070d895068d68fc23a73c *extdata/Rep_Report.Rmd
136257b71598d9f77b45249308fbe0d1 *extdata/Rep_Report2.Rmd
7e53d316fea8aea2d90399d732de9dcd *extdata/Rep_Report_Index.Rmd
79486d69c33a0cf6a39b894f5faba091 *extdata/Report.Rmd
d2d8c164ea5817561578e3affa20da02 *extdata/Report2.Rmd
6d2dc573b517f3ae445be66a6a881a6e *extdata/Report_Index.Rmd
5c73c832edec2c7cc5fa382cca64c73b *extdata/basicReport.Rmd
163f1b0ead6962e41a18bb2ccc5149ba *extdata/bt2/reads/reads_1.fastq
a0529d01ceb200399b8d6fb703cc51f1 *extdata/bt2/reads/reads_2.fastq
d9cd45a2cfd805f55eea9b7ddc76233e *extdata/bt2/refs/lambda_virus.fa
56d15ee18a2ababff9fa9aa66b00da21 *extdata/chr20.50000.bed.bz2
0ba127b8f969bb28a39acfadaf7bccaa *extdata/chr20_1.1.fq.gz
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b0b53566e020d619aa8b6c0b068e23ec *extdata/chr20_2.1.fq.gz
c5d1b5d488187eaf8d0f572e07273733 *extdata/chr20_2.2.fq.bz2
6ebd808795a9543e547aa25c08248de3 *extdata/chr20_sample_peak.bed.bz2
88d1b2ca688e7a402317d82853da4dbd *extdata/hg19.blacklist.bed
eedf14c6c49c62aa6befba57d5fd13ca *extdata/snp_info
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09626db4095d7c8bf3c1a034e4d81771 *extdata/uzmg/m1/reads_1.fastq.2
117f7c0e898df75cdbfedf5510a6a930 *extdata/uzmg/m1/reads_1.fastq.gz
cb9a8c465a0ae9427beb1bd428a1650d *extdata/uzmg/m2/reads_2.fastq.1.bz2
30f0ba5ca995e1cb1402a8d25fcaae7a *extdata/uzmg/m2/reads_2.fastq.2
be85283f2a8033100a56a320be3c56e1 *extdata/uzmg/m2/reads_2.fastq.gz
4ad3fde55e0aebdc37e23a45355756c2 *help/AnIndex
e6afb04f56a39d3c259d326c4d3c84cb *help/aliases.rds
aa40611f9793a05928c4915a84cb2047 *help/esATAC.rdb
560239ef20c2a65ea68ceaef4702f84b *help/esATAC.rdx
6ac189edc9da78e0a5da1c13f909b9a0 *help/paths.rds
17d6decf6a78c57ef2e982fcbacbe344 *html/00Index.html
2eb36e48dba7806774f28a697363f7bb *html/ATACProc-class.html
3b3236c6babeb1338d80c6e852b8c01b *html/BamToBed.html
addc6644d7e7d551fa9790515e2fb011 *html/BedToBigWig.html
dc38c06cc290dab658f7f7cc3a3edacc *html/BedUtils.html
c8d65bfa808932294e4eb5ffecb0850f *html/Bowtie2Mapping.html
44cbeeb10bccfb4da4e1f4af18fc0afc *html/CutSiteCountR.html
f9e05c8be3edcfd5caa1e460d198ea43 *html/CutSitePre.html
c297640cfd5a298aa8d190565202901d *html/FastQC.html
742b521b90bb5d3c4394367932f006ac *html/FragLenDistr.html
68624a215fefc4e1b6ddf876daa2eedb *html/FripQC.html
98168473bc6d66c6b09f260b18661cd9 *html/LibComplexQC.html
814e29e41dbfefc559a7c70110293e14 *html/PeakCallingFseq.html
4002e42d70c9522c45e7065b5579d516 *html/PeakQC.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
e972f48bc94c75eda72ecdc85b12100e *html/RGo.html
a5f568dcb6cded86e39e9d5dd836241a *html/RMotifScan.html
424963f206877e974d6dc96ed3e6a635 *html/RMotifScanPair.html
79ae21d5b6ce3e74d5f1bac68f63a9a6 *html/RPeakAnno.html
2d52687499948114e2e017ea00c35ae6 *html/RPeakComp.html
50cbc295394dc3c706f0ed6345c0cfa5 *html/RSNPs.html
2bbe078db1e99a35264283c964e91e26 *html/RemoveAdapter.html
301848a02941e94e33dd5e0307b03e8b *html/Renamer.html
110be1ad313b78b746bf917670efcc94 *html/Rsortbam.html
edee1ba5c74b43bb7b19e3fd072a81ae *html/SamToBam.html
3f184e1b13266ee849a10cb6b1dc46e2 *html/SamToBed.html
4b16882e9929d08ca3b1c6853b736dc3 *html/TSSQC.html
0c27bdd1cbc2eb4027a9bb6b5c36de48 *html/UnzipAndMerge.html
3e18ffded5857304de01744ce1a0f58f *html/atacPipe2.html
87e743cd3f9943209596299b551028b3 *html/atacRepsPipe.html
a256325719181038f00422ec84f948de *html/atacRepsPipe2.html
032775575b4a7216b9307b21fd3447ef *html/configureValue.html
75eb86c0f290fad9b743412c287b293d *html/esATAC-package.html
ce9cb4d31a2c06f4f1639c80e3b99ace *html/getMotifInfo.html
b91e43d736c9013512f049c3cecb9fd7 *java/commons-cli-1.1.jar
356b525e390ee9c6ffb800c390790e25 *java/fseq.jar
afafe33620510f6db177414ff85b8ee0 *libs/x64/esATAC.dll
