getLibsizes3 {doseR} | R Documentation

## getLibsizes3 Get Lib Sizes.

### Description

getLibsizes3 method for SummarizedExp class object, derived from getLibsizes2

### Usage

    getLibsizes3(se, subset = NULL,
    estimationType = c("quantile", "total",
    "edgeR"),quantile = 0.75, ...)

### Arguments

`se` | A SummarizedExperiment object.
`subset` | Value
`estimationType` | e.g. quantile, total, edgeR.
`quantile` | A quantile, expressed as e.g. 0.75.
`...` | Passthrough arguments.

### Value

Libsize value

### Author(s)

AJ Vaestermark, JR Walters.

### References

The "doseR" package, 2018 (in press).

### Examples

    data(hmel.se)
    getLibsizes3(se)

[Package doseR version 1.0.0 Index]