f5009b0cc7fcb0b14eec0aada5fb85f0 *CITATION
e7dfefca4f2de9a2eba4e680f9f57e19 *DESCRIPTION
3f2fa3941a2079195ad59f54c120133c *INDEX
6990d4c85875488343ea26d84f18b12a *Meta/Rd.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
59de314844cdaf9e960af2c0364fef34 *Meta/hsearch.rds
84889c78cd9035d757de34f8fd7786d7 *Meta/links.rds
8397777445d282ea3b21251c8b68cc94 *Meta/nsInfo.rds
e460a7c51b68326f2515e7e141de4bbe *Meta/package.rds
2e7db72fd366814ee4b9cadd2e3b2ce7 *Meta/vignette.rds
c377af424b4a4a4f18555630c03eb057 *NAMESPACE
79064ed32e48ac2f74536eecf47ef758 *NEWS.Rd
ebf0fc819595d631b8bf280c4b049940 *R/diffHic
375371c309f5614e68f7ae8a00b280ff *R/diffHic.rdb
6465acad84aad1b309bbdb4e8aaced95 *R/diffHic.rdx
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1541a32ebfe8cbf026c38b59aedf5cc1 *doc/diffHic.pdf
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869d5340f7893fa3c5f132bf776c7600 *exdata/cuts.rds
beece61b4f038a89e2c1e7c01d1602ef *exdata/generator.R
3bc4511ce1aab325d07a2f152d2158f6 *exdata/hic_sort.bam
60c786471d4f676eb5d7f9b56a105bc9 *help/AnIndex
c0ec363026d6b381fec4d43394e7fcf8 *help/aliases.rds
3f74cc6a726e192c50146f680a912721 *help/diffHic.rdb
3f7328cf990bce26d3dd79c52175a235 *help/diffHic.rdx
93dee2c380ac56c038d3da666b6ce8a5 *help/paths.rds
4c644ec9a39555861ed4325b6911b466 *html/00Index.html
b5492da7aab8905812a64fc705eb8e80 *html/DNaseHiC.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
58226623314fe7c85d8938c9681f4427 *html/annotatePairs.html
7ac11fd22b1cb0063139c5c1b4bcb650 *html/boxPairs.html
13d1731ef0a3e8514b7f46dba7923a50 *html/clusterPairs.html
5a2c34289122e76fc6bdd881920ce7ba *html/compartmentalize.html
53d1ad26d8a47a73d224c4bcc5ff9cce *html/connectCounts.html
b94223cfb7ab64c98984f7bc15ddcb16 *html/consolidatePairs.html
4f93da584c173bde344f5fb63516828b *html/correctedContact.html
c07c2f7d190d6d7929d9658b240d9e3c *html/cutGenome.html
b2724bdbe4238596092f0d858e791f87 *html/diClusters.html
8b723781a06c21d2b4af7f4e7d89b96b *html/diffHicUsersGuide.html
8f1c1a06a958d22b345990413169f980 *html/domainDirections.html
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4a24457507c04f7207a1ed97120c39f9 *html/extractPatch.html
5860cde8fa395ae315269d29354c6fa7 *html/filterDiag.html
758f1732a11793cb28034645853cf2eb *html/filterPeaks.html
d2778e85d9162cfb39033b1d9bae9973 *html/filters.html
89d30d61cefdd07969c039029387f181 *html/getArea.html
4369178905fc46181f5defd20c14dea2 *html/getPairData.html
aace1327f04fcc3972bd0a19162f76fa *html/loadData.html
ad3f7de56373f84b93ab4e674cae4ae8 *html/marginCounts.html
13638146f072fe6700b56b7f52068654 *html/mergeCMs.html
bf67b98aacf9768c4ee09d2fc40108fb *html/mergePairs.html
0a1c493df42219a35f5c5744a8fdd605 *html/neighborCounts.html
97c9d1c923479d50f23abe59fe127cc0 *html/normalizeCNV.html
a9dd7fcd081801caa8a71fbe9c08a24e *html/pairParam.html
2e10474aa9d9e04ad2d3696ea83020fc *html/plotDI.html
25fe3c2219b5b5d16950a01e9ebac9e1 *html/plotPlaid.html
249dd58459199ce4137a11645fa6fc93 *html/preparePairs.html
825f0961d094bbc5231819608725d976 *html/prunePairs.html
fb5289f35240ed780811403971f02f93 *html/readMTX2IntSet.html
b4468dcd5d7934a509ab03c59038638c *html/savePairs.html
77c8eb308b9f887c5284b1117aad2daa *html/squareCounts.html
f0ac4af9c99aa622d80ea1952c974a84 *html/totalCounts.html
7bf8baa63c8130285087d1fa570c0f03 *libs/i386/diffHic.dll
14d07cad10f27e8d79df64ae30b91162 *libs/x64/diffHic.dll
14ac0b20f301ef3e76b5d236693a5dfa *python/blah.py
2e668d0500a9863b1cadfcc1063891a0 *python/iter_map.py
bf40eb3117433f4ab9ed45c703a801e1 *python/presplit_map.py
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3a2f6bb068c66c4eeabf10287512f7cb *tests/simsam.R
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1d367309cec8b40f9cc21be093f88432 *tests/test-margin.Rout.save
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7dda21c95cd1f42a0fa7689803a19c56 *tests/test-neighbor.Rout.save
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31027a67d617e66f3c2c2677d47f14fd *tests/test-pair-manip.Rout.save
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52af1d2fd21f17a8d46b6f1552cfafa8 *tests/test-prune.R
5c86d72a6d35f0c4b844ade844837ed3 *tests/test-prune.Rout.save
