test {deepSNV} | R Documentation

## Get test counts

### Description

Convenience function to obtain the test counts from a deepSNV object.

### Usage

    test(deepSNV, ...)

    ## S4 method for signature 'deepSNV'
    test(deepSNV, total = FALSE)

### Arguments

`deepSNV` | a `deepSNV-class` object
`...` | Additional param passed to specific methods
`total` | Logical. If true the sum of both strands is returned

### Value

A matrix with the absolute frequencies summed over both strands.

### Examples

    data(HIVmix)
    test(HIVmix)[1:10,]
    test(HIVmix, total=TRUE)[1:10,]

[Package deepSNV version 1.30.0 Index]