Package: cytofast
Title: cytofast - A quick visualization and analysis tool for CyTOF
        data
Version: 1.0.0
Authors@R: c(person("K.A.", "Stam", email = "k.a.stam@hotmail.com", role = c("aut", "cre")),
	           person("G.", "Beyrend", email = "G.Beyrend@lumc.nl", role = "aut"))
Maintainer: K.A. Stam <k.a.stam@hotmail.com>
Description: Multi-parametric flow and mass cytometry allows exceptional high-resolution exploration of the
  cellular composition of the immune system. Together with tools like FlowSOM and Cytosplore it is possible to 
  identify novel cell types. By introducing cytofast we hope to offer a workflow for visualization
  and quantification of cell clusters for an efficient discovery of cell populations associated
  with diseases or other clinical outcomes.
Depends: R (>= 3.6.0)
Imports: flowCore, ggplot2, ggridges, RColorBrewer, reshape2, stats,
        grDevices, Rdpack, methods, grid, FlowSOM
RdMacros: Rdpack
Suggests: BiocStyle, knitr, rmarkdown
License: GPL-3
Encoding: UTF-8
LazyData: true
biocViews: FlowCytometry, Visualization, Clustering
RoxygenNote: 6.1.1
Roxygen: list(markdown = TRUE)
VignetteBuilder: knitr
Collate: 'cellCounts.R' 'cfList-class.R' 'cfList-accessors.R'
        'cfList-methods.R' 'cytoBoxplots.R' 'cytoHeatmaps.R'
        'cytottest.R' 'drawTree.R' 'msiPlot.R' 'readCytosploreFCS.R'
        'spitzer-data.R'
git_url: https://git.bioconductor.org/packages/cytofast
git_branch: RELEASE_3_9
git_last_commit: 02d560b
git_last_commit_date: 2019-05-02
Date/Publication: 2019-05-02
NeedsCompilation: no
Packaged: 2019-05-03 05:36:45 UTC; biocbuild
Author: K.A. Stam [aut, cre],
  G. Beyrend [aut]
Built: R 3.6.0; ; 2019-05-03 13:09:40 UTC; windows
