07ab8c1a9f8a50d44c0a948a9d42ec7e *CITATION
63d26d9b3c9e5c45c257617eb8621b24 *DESCRIPTION
391f19e710140c38f44d8075d386e665 *INDEX
30a917b31f350f1815f0b16ed76da49b *Meta/Rd.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
80b9271718b3daa715c767a708573d39 *Meta/hsearch.rds
10318017fba97cb25f584d4976644db2 *Meta/links.rds
4d741bed35c67847c70a06fb618e07de *Meta/nsInfo.rds
7eeb10e0f09df3ec3f2adef2bb4b614d *Meta/package.rds
4d279872fb4e9c034dc461aca2dca391 *Meta/vignette.rds
25785db5cc9d4ca3063e36e8930b25e5 *NAMESPACE
37b6654ef28dc31b509c3649bd7e2f43 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/customProDB
a8e5c16c0d973b9e7569d960f09509e0 *R/customProDB.rdb
2d258f501bdbb7bad15d7e31c1a39cf3 *R/customProDB.rdx
dd52f893f4188ec4ff2e37fba0cf9d40 *doc/customProDB.R
12db97e4ef9b2e928eeb9b3966950d68 *doc/customProDB.Rnw
49235611a8b2b760e4929a97867e254a *doc/customProDB.pdf
8fd72a5901591709623e700fa572d239 *doc/index.html
ff6a068e7b4562eb594fa55b7095e368 *extdata/bams/test1_sort.bam
ab67676c326c959cd7fd2c015fe43ecf *extdata/bams/test1_sort.bam.bai
8344f2dbd4827a68ca402168722643da *extdata/bams/test2_sort.bam
1e22c8e2b7302cf72350bd6677a38e4c *extdata/bams/test2_sort.bam.bai
e60dd9c6071f873461d6414a1bf22ded *extdata/bams/test3_sort.bam
7e5cbe91fafc7d08f479d1bdbf5501fd *extdata/bams/test3_sort.bam.bai
70a0b41a9d6105a5d7828f710a110112 *extdata/beds/junctions1.bed
af3d1b708f46275b63ef6408fbb2b310 *extdata/beds/junctions2.bed
c18472db28002552348382aeeaf46e28 *extdata/beds/junctions3.bed
711f95cacceb8d88a14969be455a57a2 *extdata/refseq/cosmic.RData
b7d466b72e98762dda61f3ddce52d57f *extdata/refseq/dbsnpinCoding.RData
0415b426b58bf6d77829b78155285a1b *extdata/refseq/exon_anno.RData
a4c824752b35109a6951ae6cd83b3bc4 *extdata/refseq/ids.RData
715499b3f2148ebec11f50af15fca781 *extdata/refseq/procodingseq.RData
3e6a7c60a7a5fc1787a8205ffd3eb9e5 *extdata/refseq/proseq.RData
29a377ba3a01347a27e8bdc1053c96bc *extdata/refseq/splicemax.RData
341b8507da3a0345c52505525577a2e3 *extdata/refseq/txdb.sqlite
9e9ea25593d6dff684ae411b999fdda6 *extdata/refseq_coding_seq.fasta
ac9339b036da666a3ecdf39b83c06ca6 *extdata/refseq_pro_seq.fasta
394854d152a49775d8bbdb1431dd3c63 *extdata/test_mul.vcf
be3edb220ac58360aeb2db168e6f0cbd *extdata/tmp/test_indel.fasta
79d7fbc7ce8526415f2ca926a967fdaa *extdata/tmp/test_junc.fasta
859042c8502b02a2a401473062330b09 *extdata/tmp/test_rpkm.fasta
92476f93183e7f1a6a9e244ed51a0adb *extdata/tmp/test_snv.fasta
a63ce322af4afe9bebc04312f9cff3c8 *extdata/tmp/test_snv.tab
1a87eb44b5e9d9ed36718422a3d6804e *extdata/vcfs/test1.vcf
49763e2078a780b127bff285658403a6 *extdata/vcfs/test2.vcf
e057764e5e4e743bfb8f398698d31834 *extdata/vcfs/test3.vcf
bfbb508b0c5501a68f3b84360d0b9734 *help/AnIndex
9680c09ed67638ae9e334ccd97467c6c *help/aliases.rds
0a4b91c3c3c18cc436fb94cc7b9bc41f *help/customProDB.rdb
173c8dbcc8a27e246b38f9cb57e47f8c *help/customProDB.rdx
486acda83ac07f41972cc929cbd92d8c *help/paths.rds
ced7bcbd787fb8affd51a832e837f476 *html/00Index.html
837f2008822c987a2e28da894ac47214 *html/Bed2Range.html
6b37c933fceb7e373bbe2430cbbd7bac *html/InputVcf.html
4bd1f675ac1a2491a5fb1db25503b6b4 *html/JunctionType.html
748950953039c963877ffb78896be060 *html/Multiple_VCF.html
ceced973eb054788179128b9eab8779a *html/OutputNovelJun.html
5c72a024e5a11e17adc7f1eeaff4cfbe *html/OutputVarprocodingseq.html
8cc9f002c3fa04f50dbf9fd459cbb1e4 *html/OutputVarproseq.html
ba8b2d19b872c3b51da3ee9d1f28e2cb *html/OutputVarproseq_single.html
f3dc3759ae7cb2871a3a77a77d78ca35 *html/Outputaberrant.html
81688095700294e7ee9d2e0bb5405f91 *html/Outputproseq.html
259874713388ac4f473f5c3ca640c806 *html/OutputsharedPro.html
1aef5dbfdc76b335b41346a652e04d7d *html/Positionincoding.html
5e8b45ffddf9a8652228b755b2c9af44 *html/PrepareAnnotationEnsembl.html
8aec649c117a5db77321746afd42efa8 *html/PrepareAnnotationRefseq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
9abe0d207da5fb8bb9120709919e1552 *html/SharedJunc.html
095b647121bc18aaa664e21caffa03ae *html/Varlocation.html
c875b81509c60514d64470821557ea70 *html/aaVariation.html
0fdd9996363b00087bfdef19b50e0808 *html/calculateRPKM.html
aa007cd6b51c461010bab5d805349f49 *html/easyRun.html
b1b66415fa0e7b588d7051a96ed4ac39 *html/easyRun_mul.html
