checkDataObject {compcodeR} | R Documentation

## Check a list or a `compData` object for compatibility with the differential expression functions interfaced by `compcodeR`

### Description

Check if a list or a `compData` object contains the necessary slots for applying the differential expression functions interfaced by the `compcodeR` package. This function is provided for backward compatibility, see also `check_compData` and `check_compData_results`.

### Usage

    checkDataObject(data.obj)

### Arguments

`data.obj` | A list containing data and condition information, or a `compData` object.

### Author(s)

Charlotte Soneson

### Examples

    mydata.obj <- generateSyntheticData(dataset = "mydata", n.vars = 1000,
                                        samples.per.cond = 5, n.diffexp = 100)
    checkDataObject(mydata.obj)

[Package compcodeR version 1.20.1 Index]