COSMIC_UCSC             Create one track of the genomic positions of
                        variants from COSMIC [obselete]
ChIPTF_ENCODE           Creates a TF motif track from ENCODE
ClinVarCnv_UCSC         Create one track of the genomic positions of
                        variants from the ClinVar database (CNV only)
ClinVarMain_UCSC        Create one track of the genomic positions of
                        variants from the ClinVar database (variants
                        only)
CoreillCNV_UCSC         Create one track of the genomic positions of
                        CNV in chromosomal aberration and inherited
                        disorders from the NIGMS Human Genetic Cell
                        Repository data
DNAse_UCSC              Creation of an UCSC's DNase clusters track
DNaseI_FANTOM           Creates a enhancer/promoter track from FANTOM
DNaseI_RoadMap          Creates a promoter/enhancer regions track from
                        a file of RoadMap
GAD_UCSC                Create one track of the genomic positions of
                        variants from the Genetic Association Database
                        (GAD)
GWAScatalog_UCSC        Create one track of the genomic positions of
                        variants from the GWAS catalog
GeneReviews_UCSC        Create one track of the genomic positions of
                        variants from GeneReviews
HiCdata2matrix          Creates a HiC matrix from a file (Rao et al.,
                        2014)
HistoneAll_UCSC         Create multiple tracks of histone modifications
                        from the UCSC genome browser
HistoneOne_UCSC         Create one track of one histone modification
                        profile from the UCSC genome browser
ISCA_UCSC               Create one track of the genomic positions of
                        variants from ISCA [obselete database]
TFBS_FANTOM             Creates a TFBS motif track from FANTOM
bindingMotifsBiomart_ENSEMBL
                        Creates a binding motif track from ENSEMBL
chrUCSC2ENSEMBL         Removing "chr" to the chromosome number from
                        UCSC to transform it to ENSEMBL chromosome
                        format
chromHMM_RoadMap        Creates a ChromHMM track from a file of RoadMap
chromatinHMMAll_UCSC    Creating multiple chromHMM tracks from the UCSC
                        genome browser
chromatinHMMOne_UCSC    Creating one chromHMM track from the UCSC
                        genome browser
coMET-package           visualisation of regional epigenome-wide
                        association scan (EWAS) results and DNA
                        co-methylation patterns (and also for other
                        omic-WAS)
comet                   Visualize EWAS results in a genomic region of
                        interest
comet.list              List the correlations between omic features
comet.web               Visualize EWAS results in a genomic region of
                        interest with predefined annotation tracks
cpgIslands_UCSC         create track CpG Island from UCSC
dgfootprints_RoadMap    Creates a track of DNA motif positional bias in
                        digital genomic Footprinting Sites (DGFP) from
                        a file of RoadMap
eQTL                    Creates a track from a file for eQTL data
eQTL_GTEx               Creates a eQTL track from GTEx
gcContent_UCSC          Create one track of GC content from UCSC
genesName_ENSEMBL       Obtain the genes names in the genomic regions
                        of interest from ENSEMBL
genes_ENSEMBL           Create one track of the genes in the genomic
                        regions of interest from EMSEMBL
imprintedGenes_GTEx     Creates a imprinted genes track from GTEx
interestGenes_ENSEMBL   Create one track of the genes in the genomic
                        regions of interest from EMSEMBL
interestTranscript_ENSEMBL
                        Create a track of transcripts from ENSEMBL
knownGenes_UCSC         Create a track of known genes from the UCSC
                        genome browser
metQTL                  Creates a track from a file for metQTL data
miRNATargetRegionsBiomart_ENSEMBL
                        Creates a track of miRNA target regions from
                        ENSEMBL
otherRegulatoryRegionsBiomart_ENSEMBL
                        Creates a track of other regulatory regions
                        from ENSEMBL
psiQTL_GTEx             Creates a psiQTL track from GTEx
refGenes_UCSC           Create a track of RefSeq genes from the UCSC
                        genome browser
regulationBiomart_ENSEMBL
                        Create a regulation track from ENSEMBL
regulatoryEvidenceBiomart_ENSEMBL
                        Creates a regulatory feature track from ENSEMBL
regulatoryFeaturesBiomart_ENSEMBL
                        Creates a regulatory feature track from ENSEMBL
regulatorySegmentsBiomart_ENSEMBL
                        Creates a binding motif track from ENSEMBL
                        [obselete]
repeatMasker_UCSC       Create one track of the genomic positions of
                        regions from repeatMasker_UCSC
segmentalDups_UCSC      Create one track of the genomic positions of
                        regions from segmentalDups_UCSC
snpBiomart_ENSEMBL      Create a short variation track from ENSEMBL
snpLocations_UCSC       Create a SNP track from UCSC
structureBiomart_ENSEMBL
                        Create a structural variation track from
                        ENSEMBL
transcript_ENSEMBL      Create a track of transcripts from ENSEMBL
