iniCall,CNVDetectionResult-method {cn.mops} | R Documentation

## This generic function returns the informative/non-informative call of a CNV detection method stored in an instance of `CNVDetectionResult-class`. The I/NI call is a measure for a genomic segment across all samples, whether this segment is a CNV region (informative) or a normal genomic region (non-informative).

### Description

This generic function returns the informative/non-informative call of a CNV detection method stored in an instance of `CNVDetectionResult-class`. The I/NI call is a measure for a genomic segment across all samples, whether this segment is a CNV region (informative) or a normal genomic region (non-informative).

### Usage

    ## S4 method for signature 'CNVDetectionResult'
    iniCall(object)

### Arguments

`object` | An instance of "CNVDetectionResult"

### Value

`iniCall` returns a "GRanges" object containing the individual calls.

### Author(s)

Guenter Klambauer klambauer@bioinf.jku.at

### Examples

    data(cn.mops)
    r <- cn.mops(X[1:100,1:5])
    iniCall(r)

[Package cn.mops version 1.30.0 Index]