c907c53ebea185a9692abf6a7c4a9063 *DESCRIPTION
1b1474442473c4d14baa6acf93cfdba6 *INDEX
59c15cea9ee4ab26f6c261e4af79b9eb *Meta/Rd.rds
0d73cb45555817dcba2ba700d00b7456 *Meta/data.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
000fb8fd82f6a7d255c25169a82b61cc *Meta/hsearch.rds
7b1f79ebae79d722e2b1f303315c76a6 *Meta/links.rds
3cc6f39b618933ab41dc6a9ac4b1ad62 *Meta/nsInfo.rds
ccf1b4f959c64e9b57c0539be62f320d *Meta/package.rds
4a3be84f5c7390764351c25f5cefa423 *Meta/vignette.rds
8406fd1414247da7405904c2546ad3c6 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/chipseq
fce8b334e4d65eb89d846bb4ba119d96 *R/chipseq.rdb
fb4e288f8a685b30aa81372b92c941bd *R/chipseq.rdx
c67ac49dbe2a5c389a1b642feed5cbc9 *Scripts/AntibodyComparison.Rnw
630a273418c2f9ea72fc5134e7ec70dd *Scripts/CTCFBindingSites.R
ca9cf8135dd0e90c84a79c7d25b67f8e *Scripts/CTCF_ERV.R
aee97330bc6fc5325ce931bed2ce78db *Scripts/CopyNumber.Rnw
b9fdf9ddd9d25837d91b84181d44a947 *Scripts/Islands.Rnw
d3e0e7d6d67905e3f34b7b3115d6729a *Scripts/MyoD.R
70ed9c49dec4afdb22fde785402b70ba *Scripts/PairedEndComparison.Rnw
dcb4e37001f03145920d1c8ff3117e0f *Scripts/PeakContextHuman.Rnw
e22d7dbd060325161369d0e7e2e58809 *Scripts/PeakContextMouse.Rnw
bf012dbfcfee1aee1d476b131ff815b6 *Scripts/PeakCutoff.Rnw
027314cba8b874dc1d337a24048faf6a *Scripts/PeakModel.Rnw
10a39afb911fbcfd768ce3f473074e6e *Scripts/PeakReproducibility.Rnw
fc5f8df77609407d4dde159745ead9de *Scripts/PeaksByCopyNumber.Rnw
727166198a38cc8d25d326ca1eb40ec4 *Scripts/RateComparison.Rnw
aa70f1fa6f051112a2d02f42a95ce676 *Scripts/ReadAndSave54.R
ae7894a5b856dbaf4eb47efb18a37aaa *Scripts/ReadAndSaveCTCF.R
42e617263ffdc34e7ca72e2812520574 *Scripts/ReadAndSaveData.R
05caa000363574dcdbb4f33f43adc444 *Scripts/ReadAndSaveSimulation.R
0499bfe7ca2da5b930300dcea653fe3f *Scripts/SolexaSim.R
8418412635db910c56247de35566e5e9 *Scripts/abc.rda
b2b3308f0d60517c9e1d4d10aadc2ac9 *Scripts/antibody_comparison.R
ed4f51f8bcebaf4eeeb5c96ff4879c24 *Scripts/dePeaks.R
f7d49434a22023a99f7926fb6ee4f6e6 *Scripts/diffpeak.R
3ed9c551e8103a45b28b99eb559a484f *Scripts/diffpeaks.R
837228bc953727b032e40cbb6205a57d *Scripts/estimate_fragment_size.R
a06c7dabaad7ed64c565327650ca8cc9 *Scripts/fibroblasts.R
e72faaaedf165cab4014877a5c052884 *Scripts/getIsochores.R
3783000fdd3bf5e218849c3c4f13125f *Scripts/hmm.R
4b7c58b557ccce7b42ccc011b4d82021 *Scripts/human-islands.R
eeaf2ff4f62313033a80205dee813c86 *Scripts/isochore_comparison.R
f7328263dd15bd2151f28b1608cbbb49 *Scripts/isochores.mm9.rda
c7a667f5161cfde7f01daaa6d4caa464 *Scripts/negbinomial.R
a2ca467d2433f490d5cc6b1343690bb2 *Scripts/peakContext.R
786298cc4d4d8d7fba7ac8a3cdf3bdc5 *Scripts/peak_mle.R
e14f736999fe4d70f015fb4d4e39ba68 *Scripts/poisson.R
2d307d1468ebac6eea2f052f07bb4e30 *Scripts/simulate.R
bf32b8fbb5ae9f6aca83195bf78deae3 *Scripts/singletons.Rnw
41c6ab6fd784ed7445193929413afc97 *Scripts/solexa54.R
601e7f10d36f8c8da2d856f410aef879 *data/cstest.rda
ecf5bb4234b028fcab1fdb3c88b52ab0 *data/datalist
2427feeb636619e50d1023c80511d998 *doc/Workflow.R
219e82a7af0f2e1d04933c8b87e6166a *doc/Workflow.Rnw
13e61dff45443510e1bc2a8f729d52d5 *doc/Workflow.pdf
32207b13a2f38060064f4cc8b0c8c442 *doc/index.html
7d4b71aca2e2ed20799a1338b54b87bb *help/AnIndex
86803b6dcab98922b6f2f2ff929715fb *help/aliases.rds
122e351dc7abb7dcb720ea7c024bc9eb *help/chipseq.rdb
699dd13e051c65167bf2a0b29ab0bd2f *help/chipseq.rdx
3c42c9b185ec2a838a27b9a19b916493 *help/paths.rds
ed8f622b75af1a094c47be35a702971e *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
52e4405cd12a6eb27d48cce8166fa32f *html/chipseqFilter.html
2390ea16099c835e74ee0263498a20de *html/coverageplot.html
80744e298a6aef454ca38a048df4d92e *html/cstest.html
f4cff958ebe18fce9a41b3fe47e677e3 *html/diffPeakSummary.html
3b33276366edc0437d46de943cc93108 *html/estimate.mean.fraglen.html
88aa937ff52d8dfb1b39127acf9db02d *html/islandDepthPlot.html
a35a3c896bb3a10aab0faeb66a4d5402 *html/laneSubsample.html
8d7641316524243eef2ef4662a3d820a *html/peakCutoff.html
b65d1279d2480fbfc571c6c50e14ef94 *html/peakSummary-methods.html
29be5a4453310a175e26e772fbe6d970 *html/subsetSummary.html
23a09708d5aef7d8f3809d8ac5f5f930 *libs/i386/chipseq.dll
4ef29edf56465b57a28c4225815ea25d *libs/x64/chipseq.dll
