performGSAperCellLine {cTRAP} | R Documentation

## Perform gene set enrichment (GSA) per cell line

### Description

Perform gene set enrichment (GSA) per cell line

### Usage

    performGSAperCellLine(cellLine, perturbations, pathways)

### Arguments

`cellLine` | Character: cell line(s)
`perturbations` | `l1000perturbations` object: file with L1000 loaded perturbations (check `loadL1000perturbations`)
`pathways` | List of gene sets to check.

### Value

Data frame containing gene set enrichment analysis (GSEA) results per cell line

[Package cTRAP version 1.2.0 Index]