BrainMap                Internal- Overlaps regional enrichment into a
                        single section
Comp-class              Comp keeps track of Spatial Enrichment
                        calculations and parameters
CreateBrain             Overlap spatial enrichment information and
                        anatomical organization
GetGenes                GenGenes
InABA                   Quick search for presence of genes in the ABA
                        list
PValue.onetail          Calculate p-value from bootstrapped sample
PlotBrain               Color and Plot the SGSE image
PlotEnrich              PlotEnrich
PlotPred                Plot your temporal predictions
Pred-class              Pred
RandomTissueSummary     Generate a random overlap
SpatialEnrichment       Calculate the presence of your gene set within
                        each brain region
TissueSummary           Internal-Identify the number of genes expressed
                        in each tissue
available_areanames     List of areas that are present in a plotted
                        brain slice
brainrange              brainrange
dat                     In vitro temporal data of human neural
                        progenitor cells and neurons
hipp                    Hippocampal genes using the adult human brain
                        as reference
predict_time            Predict developmental time from gene expression
                        data
reColor                 Color in the brain images based on enrichment
                        values
testEnrich              Calculate significance of gene set enrichment
tis_in_region           List of regions that are supported by given
                        tissue
tis_set                 List of tissues that support a given region in
                        the brain plot
vth                     VTH genes identified from Allen Brain Atlas
                        developing human
whichtissues            Identify the tissues where a set of genes are
                        expressed
