spectraCreate {adductomicsR} | R Documentation

## Deconvolute both MS2 and MS1 levels scans adductomics

### Description

Deconvolute both MS2 and MS1 levels scans adductomics

### Usage

    spectraCreate(MS2file = NULL, TICfilter = 10000, DNF = 2, minInt =
    100, minPeaks = 5)

### Arguments

`MS2file` | character vector of mzXML file locations
`TICfilter` | numeric minimimum total ion current of an MS/MS scan. Any MS/MS scan below this value will be filtered out (default=0).
`DNF` | dynamic noise filter minimum signal to noise threshold (default = 2), calculated as the ratio between the linear model predicted intensity value and the actual intensity.
`minInt` | numeric minimum intensity value
`minPeaks` | minimum number of signal peaks following dynamic noise filtration (default = 5).

### Value

list of MS2 spectra

[Package adductomicsR version 1.0.0 Index]