summary.data_adapt {adaptest} | R Documentation

## Summary tables for data_adapt objects

### Description

Summary tables for data_adapt objects

### Usage

    ## S3 method for class 'data_adapt'
    summary(object, type = "adapt_param", ...)

### Arguments

`object` | (data_adapt) object as returned by `adaptest`
`type` | (character) - 'adapt_param' or 'biomarker'. 'adapt_param' mode summarizes the data-adaptive target parameter. 'biomarker' mode summarizes chracteristics of the biomarkers from the original data
`...` | not implemented

### Value

(data.frame) of the summary statistics

`type = 'adapt_param'` wtih columns: 'data-adaptive parameters', 'Differential expression', 'p-values', 'q-values'

`type = 'biomarker'` wtih columns: 'biomakers', 'mean rank', ' appear in top'

[Package adaptest version 1.4.0 Index]