computeESTIMATEscore {TNBC.CMS} | R Documentation

## Computation of stromal and immune scores

### Description

Computes stromal and immune scores. This function was borrowed from the `estimate` package and changed to accept R object as input.

### Usage

    computeESTIMATEscore(mat)

### Arguments

`mat` | A matrix of gene expression with genes in rows and samples in columns (rownames corresopnding to gene symbol).

### Value

A data frame containing stromal and immune scores

[Package TNBC.CMS version 1.0.0 Index]