e7d2abf8fa4c49f5b1134d589021c199 *DESCRIPTION
27b80f7f7185212dc706b536da0f13b5 *INDEX
6efc50391d749c118835200b900239c4 *Meta/Rd.rds
25ec83abd15128a8ae9185d893802c45 *Meta/features.rds
09ccf215a6d4018820c6a9045d91d6b4 *Meta/hsearch.rds
e58ca354d860e689ada5ccc94caca3fd *Meta/links.rds
51a8d3f671ec2b23b4f3658940533980 *Meta/nsInfo.rds
d48ff197769b088b28c31bdef1db17ed *Meta/package.rds
8ea2d02f81a1e393a671a6782f745c52 *Meta/vignette.rds
bb16bdb8442a85fe4a82fd4b3b10a4b5 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/SplicingGraphs
100b8e5f9d70c2fc6403bb30506b2b13 *R/SplicingGraphs.rdb
dc7285c65bf943182dde3818f4b0b661 *R/SplicingGraphs.rdx
fc9582120b3d0c2d00f824da7ee3bd1c *doc/SplicingGraphs.R
a626d844d683e1994f10de60ca803113 *doc/SplicingGraphs.Rnw
8cac5636cbb920cdf66a130c4261efc0 *doc/SplicingGraphs.pdf
88377b5fd65dbaaf32cf912ac99e20ac *doc/index.html
e927d6e86c26ef2f567f538e4d02c6bb *extdata/ASpatterns.txt
b10a130d5d8e8aa34a67c0676e678e42 *extdata/TSPCsg.rda
2496dff4893d460511d871a0c485aa6b *extdata/toy_genes.gff3
648ca39416010bda3340da48c26912ef *extdata/toy_overlaps.txt
62072a44e72d0ea965e19a12820417ca *extdata/toy_reads.sam
ff355f3e1adcaa01590064536ff5380f *help/AnIndex
a9aaa9a88d30f03e7be1888c26a6cb63 *help/SplicingGraphs.rdb
bf68d3241f096cbd0aa37332c15283ef *help/SplicingGraphs.rdx
393accc3e231d34dc7b70f5431adcf67 *help/aliases.rds
097e5f2e620cdc624a67da3b468426d6 *help/paths.rds
78477687d2aa9b98a3d30ed76715a908 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
5e7cf23d65a088f0d03dde4699315695 *html/SplicingGraphs-class.html
0d4289fba22d27efc1ecdd27a75ad751 *html/SplicingGraphs-package.html
f8414fe8dc1fe6f68194d3d8da8ef965 *html/TSPCsg.html
0ccd297adbd3192b864bafbfcc615766 *html/assignReads.html
599cbed4f67913425a388e17abde17e3 *html/bubbles-methods.html
8d80076acd8f360a8101e1cacb522fee *html/countReads-methods.html
b417e818630f45e843af2d6d642c5d83 *html/plotTranscripts-methods.html
e7ad94ae62023627783127bec8d14571 *html/rsgedgesByGene-methods.html
bf88990b5d72b4b8cfb5c1314a3b90c0 *html/sgedges-methods.html
29ca7fe3b8828abea40df36c8cae93eb *html/sgedgesByGene-methods.html
8da731f8b3a75dcb824ea1f3b6e2a037 *html/sgraph-methods.html
5693fed1b660e75108a2e37bf0bf9e9c *html/toy_data.html
88cee1c720100fa0eeea74ac8406e3a6 *html/txpath-methods.html
f22485f979fcbadb1e6d5c1498f2de11 *scripts/TSPC-utils.R
0ee9097358b000f70562de18bc67a066 *scripts/create-vignette-plots.R
44830c9a0141fe8277304d7419d7a20d *scripts/makeTSPCsg.R
1bba688669d20686db16f84dc56a8e2f *unitTests/test_countReads-methods.R
