getFASTAFromUniProt {Rcpi} | R Documentation

## Retrieve Protein Sequence in FASTA Format from the UniProt Database

### Description

Retrieve Protein Sequence in FASTA Format from the UniProt Database

### Usage

    getFASTAFromUniProt(id, parallel = 5)

### Arguments

`id` | A character vector, as the protein ID.
`parallel` | An integer, the parallel parameter, indicates how many process the user would like to use for retrieving the data (using RCurl), default is `5`. For regular cases, we recommend a number less than `20`.

### Details

This function retrieves protein sequences in FASTA format from the UniProt database.

### Value

A list, each component contains one of the protein sequences in FASTA format.

### Author(s)

Nan Xiao <https://nanx.me>

### References

UniProt. https://www.uniprot.org/

UniProt REST API Documentation. https://www.uniprot.org/faq/28

### See Also

See `getSeqFromUniProt` for retrieving protein represented by amino acid sequence from the UniProt database. See `readFASTA` for reading FASTA format files.

### Examples

    id = c('P00750', 'P00751', 'P00752')

    getFASTAFromUniProt(id)

[Package Rcpi version 1.20.1 Index]